| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is resA [H]
Identifier: 160877113
GI number: 160877113
Start: 4718883
End: 4719881
Strand: Reverse
Name: resA [H]
Synonym: Sbal195_4009
Alternate gene names: 160877113
Gene position: 4719881-4718883 (Counterclockwise)
Preceding gene: 160877114
Following gene: 160877112
Centisome position: 88.27
GC content: 45.65
Gene sequence:
>999_bases ATGTATTTTCTGTGTAAATGGCTGCAAATCACTGGCCCCATAGTGCGGATGCGAGTGGTCTATCAATTTAAGGAAAACAC TATGTTGTTACGTCAAATCATTGTTATGTGCCTTGCCGTCGTGAGTTTTGCTACGTTTGCGGGCGATAAAGCCTATCAAG ATATCGCACTTAAAACCTATCCCGATCAGCAGCAAGTGACCTTAGGCAGCGTTGCGGGTGACAAGCCGATATACCTAAAG TTTTGGGCAACTTGGTGTCAGCCCTGTATGGAACAAATGCCACATTTTGAAGCCCTGCAGAAGAAGTATCAGGACAAGAT TAATATCGTCGCAGTGAACATCAATATTAATGAAGAGCAGCCTAAGATCGCTGACGTTATCGCGCGCTTCGGGCTTACTA TGCCCGTGTGGTTGGATAATGAAGGTGAGTTGGGTGTTGCTTTAGGCTTGGTCGGCACGCCCTATAGTGTATTGATCAAT CGTGCCGGTGATGTGGTTTACACTAGCCACGAGTCAGACGCTAATCTAGATAAATTTATCGATATGTTGGCGAATGGCCA AGAGTTGACCGCGCAGACAACAGAGGCGCCCAGTGCCGAGCAAACGGCTAAGTTACTGAAGCCTTGGGAACAAGGTGAGC ATTTACTCTTTTTCACCGCAACTTGGTGTGATTGGTACTTGGCAGAGAGCCGTCCAGAAATGTCTAAAGAGTGTATTGCC GTCCAAAAAGGGTTAAATAATCTCGCGCAAAAAGTGCCGAATAAAGCGTGGCACGGTGTGGTCAATCACCTGTGGACAGA CGATAAAGCGCTCGAAGATTTTAAGCAGCTTTATCAAACTAAAATCGATTTTAGTATCGATGAGTTAGGCGTGTTATTTA ATCATTTTAAAATCCGCAATATTCCGACGTTACTTTGGGTTAAGGACGGGAAAGTCGTTCAGCGCATTACCGATTTTAGC CAGCCAGAGCAACTCGTTAAGCAGCTCTCGGCGCAATAA
Upstream 100 bases:
>100_bases TCACCAAGGCTTACATTTTACATGGCTAAATTAGCGGCTTGTTAGTTTATACTCACTGTTTAAAGGTTGGCTGCTGGGTA GACTGTCGCTCCCTTTAATT
Downstream 100 bases:
>100_bases GCTCATTTCAACTGTTAGGCCTTTGATAGATAGCCAAAGGCCTTTTTCTTAAAAGATTGAATCGATACACAACGCAATAT TCGGTATTAAAGTGATTGCC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MYFLCKWLQITGPIVRMRVVYQFKENTMLLRQIIVMCLAVVSFATFAGDKAYQDIALKTYPDQQQVTLGSVAGDKPIYLK FWATWCQPCMEQMPHFEALQKKYQDKINIVAVNININEEQPKIADVIARFGLTMPVWLDNEGELGVALGLVGTPYSVLIN RAGDVVYTSHESDANLDKFIDMLANGQELTAQTTEAPSAEQTAKLLKPWEQGEHLLFFTATWCDWYLAESRPEMSKECIA VQKGLNNLAQKVPNKAWHGVVNHLWTDDKALEDFKQLYQTKIDFSIDELGVLFNHFKIRNIPTLLWVKDGKVVQRITDFS QPEQLVKQLSAQ
Sequences:
>Translated_332_residues MYFLCKWLQITGPIVRMRVVYQFKENTMLLRQIIVMCLAVVSFATFAGDKAYQDIALKTYPDQQQVTLGSVAGDKPIYLK FWATWCQPCMEQMPHFEALQKKYQDKINIVAVNININEEQPKIADVIARFGLTMPVWLDNEGELGVALGLVGTPYSVLIN RAGDVVYTSHESDANLDKFIDMLANGQELTAQTTEAPSAEQTAKLLKPWEQGEHLLFFTATWCDWYLAESRPEMSKECIA VQKGLNNLAQKVPNKAWHGVVNHLWTDDKALEDFKQLYQTKIDFSIDELGVLFNHFKIRNIPTLLWVKDGKVVQRITDFS QPEQLVKQLSAQ >Mature_332_residues MYFLCKWLQITGPIVRMRVVYQFKENTMLLRQIIVMCLAVVSFATFAGDKAYQDIALKTYPDQQQVTLGSVAGDKPIYLK FWATWCQPCMEQMPHFEALQKKYQDKINIVAVNININEEQPKIADVIARFGLTMPVWLDNEGELGVALGLVGTPYSVLIN RAGDVVYTSHESDANLDKFIDMLANGQELTAQTTEAPSAEQTAKLLKPWEQGEHLLFFTATWCDWYLAESRPEMSKECIA VQKGLNNLAQKVPNKAWHGVVNHLWTDDKALEDFKQLYQTKIDFSIDELGVLFNHFKIRNIPTLLWVKDGKVVQRITDFS QPEQLVKQLSAQ
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: NA
Molecular weight: Translated: 37910; Mature: 37910
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFLCKWLQITGPIVRMRVVYQFKENTMLLRQIIVMCLAVVSFATFAGDKAYQDIALKTY CCEEEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEC PDQQQVTLGSVAGDKPIYLKFWATWCQPCMEQMPHFEALQKKYQDKINIVAVNININEEQ CCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEECCCC PKIADVIARFGLTMPVWLDNEGELGVALGLVGTPYSVLINRAGDVVYTSHESDANLDKFI CHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCCCEEEECCCCCCCHHHHH DMLANGQELTAQTTEAPSAEQTAKLLKPWEQGEHLLFFTATWCDWYLAESRPEMSKECIA HHHHCCCHHEECCCCCCCHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHCCCCHHHHHHHH VQKGLNNLAQKVPNKAWHGVVNHLWTDDKALEDFKQLYQTKIDFSIDELGVLFNHFKIRN HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC IPTLLWVKDGKVVQRITDFSQPEQLVKQLSAQ CCEEEEEECCHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MYFLCKWLQITGPIVRMRVVYQFKENTMLLRQIIVMCLAVVSFATFAGDKAYQDIALKTY CCEEEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEC PDQQQVTLGSVAGDKPIYLKFWATWCQPCMEQMPHFEALQKKYQDKINIVAVNININEEQ CCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEEEECCCC PKIADVIARFGLTMPVWLDNEGELGVALGLVGTPYSVLINRAGDVVYTSHESDANLDKFI CHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCCCEEEECCCCCCCHHHHH DMLANGQELTAQTTEAPSAEQTAKLLKPWEQGEHLLFFTATWCDWYLAESRPEMSKECIA HHHHCCCHHEECCCCCCCHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHCCCCHHHHHHHH VQKGLNNLAQKVPNKAWHGVVNHLWTDDKALEDFKQLYQTKIDFSIDELGVLFNHFKIRN HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC IPTLLWVKDGKVVQRITDFSQPEQLVKQLSAQ CCEEEEEECCHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA