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The map label for this gene is cycH [H]

Identifier: 160877103

GI number: 160877103

Start: 4708660

End: 4709346

Strand: Reverse

Name: cycH [H]

Synonym: Sbal195_3999

Alternate gene names: 160877103

Gene position: 4709346-4708660 (Counterclockwise)

Preceding gene: 160877104

Following gene: 160877102

Centisome position: 88.07

GC content: 43.96

Gene sequence:

>687_bases
ATGGTCAGTTTAGGGTTAGTTATTTGCATGTGTTTAGGTCTGTTCATTGCTTATATTTATTGGCATCACGGCCGCTTGAA
ATTGACATTCGCTATGGCTCAATTGCCGTCAATGTCGAGCAAAGTGCCCTTTGCCATGGGCTTAATACTCGTGTTACTGA
CCTTAGTCATTTATAGCCAAATAGGGCGTTTTCAAGATTGGGAAAAAGGAAAAGTTGATGAAAATATTGATTATTTAGTA
GCTGCAGAAATTACCAAAGCCACGCGTTTGGCAGAACGAGAACCACAAAATACTGAGGCACTCATGTCTTTAGCTCGGGC
TTATAGCGCGGGTGGTTTGTACTCGGATGCTGTGTTGACCCTGGATAAGTTGCTCATGCTATCTGGAGACGATGCAGAAG
TTTTGGGCGCTAAGGCTAACGCACTTTACTACCGTGAACGTCGGCAAATAACACCAGAAACCCAGCAGGTGATTGCCAAG
GTTTTAGCGCACTCACCCTTTGAATCACAGACACAGTTGTTACTCGCTACCGATGCCTATCTGCACGCACGCTACCAAGT
AGCTATAGATCATTGGCGGTTACTGCTGGCACAACCAAGCAGCAGTATTAATCGTGAAGTCATCAATAACGCGATTATAA
AAGCACAAATCAAATTGAATGAAAGTGGAGATAAACCAAGTCGCTAG

Upstream 100 bases:

>100_bases
GAGATGAAGCATCAAAGCATGATGCCTGCCCACGGTTAGTGCACCGTTTGAGTTAGCTTGGGTAAATGTGTCACTTGCTA
TGACCTGTTTGGGGAATGAG

Downstream 100 bases:

>100_bases
CCATTTTCAGGCAAGTTAAGTCGATAACGATATAAATAAAAACGTCGGTTGAAAACCGATAGATGGAGGATGATGTGAGT
GAAAATATAGAGAGACGGAG

Product: formate-dependent nitrite reductase NrfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVSLGLVICMCLGLFIAYIYWHHGRLKLTFAMAQLPSMSSKVPFAMGLILVLLTLVIYSQIGRFQDWEKGKVDENIDYLV
AAEITKATRLAEREPQNTEALMSLARAYSAGGLYSDAVLTLDKLLMLSGDDAEVLGAKANALYYRERRQITPETQQVIAK
VLAHSPFESQTQLLLATDAYLHARYQVAIDHWRLLLAQPSSSINREVINNAIIKAQIKLNESGDKPSR

Sequences:

>Translated_228_residues
MVSLGLVICMCLGLFIAYIYWHHGRLKLTFAMAQLPSMSSKVPFAMGLILVLLTLVIYSQIGRFQDWEKGKVDENIDYLV
AAEITKATRLAEREPQNTEALMSLARAYSAGGLYSDAVLTLDKLLMLSGDDAEVLGAKANALYYRERRQITPETQQVIAK
VLAHSPFESQTQLLLATDAYLHARYQVAIDHWRLLLAQPSSSINREVINNAIIKAQIKLNESGDKPSR
>Mature_228_residues
MVSLGLVICMCLGLFIAYIYWHHGRLKLTFAMAQLPSMSSKVPFAMGLILVLLTLVIYSQIGRFQDWEKGKVDENIDYLV
AAEITKATRLAEREPQNTEALMSLARAYSAGGLYSDAVLTLDKLLMLSGDDAEVLGAKANALYYRERRQITPETQQVIAK
VLAHSPFESQTQLLLATDAYLHARYQVAIDHWRLLLAQPSSSINREVINNAIIKAQIKLNESGDKPSR

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790513, Length=123, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25469; Mature: 25469

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLGLVICMCLGLFIAYIYWHHGRLKLTFAMAQLPSMSSKVPFAMGLILVLLTLVIYSQ
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IGRFQDWEKGKVDENIDYLVAAEITKATRLAEREPQNTEALMSLARAYSAGGLYSDAVLT
HCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LDKLLMLSGDDAEVLGAKANALYYRERRQITPETQQVIAKVLAHSPFESQTQLLLATDAY
HHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHH
LHARYQVAIDHWRLLLAQPSSSINREVINNAIIKAQIKLNESGDKPSR
HHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEEEEEEECCCCCCCCC
>Mature Secondary Structure
MVSLGLVICMCLGLFIAYIYWHHGRLKLTFAMAQLPSMSSKVPFAMGLILVLLTLVIYSQ
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IGRFQDWEKGKVDENIDYLVAAEITKATRLAEREPQNTEALMSLARAYSAGGLYSDAVLT
HCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LDKLLMLSGDDAEVLGAKANALYYRERRQITPETQQVIAKVLAHSPFESQTQLLLATDAY
HHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHH
LHARYQVAIDHWRLLLAQPSSSINREVINNAIIKAQIKLNESGDKPSR
HHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA