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The map label for this gene is yxnA [H]

Identifier: 160877086

GI number: 160877086

Start: 4686388

End: 4687065

Strand: Direct

Name: yxnA [H]

Synonym: Sbal195_3982

Alternate gene names: 160877086

Gene position: 4686388-4687065 (Clockwise)

Preceding gene: 160877085

Following gene: 160877089

Centisome position: 87.64

GC content: 53.54

Gene sequence:

>678_bases
ATGATATTAATTACCGGCGCCAGCAGTGGTTTAGGCGCGGCGCTAGCATCACTCTACGCCAAAGAAAATGAACCGCTGAC
ACTCACAGGCCGCAATGCCGAGCGTCTACAAACCGTCGCCAATGCATTAACGCCCTTCTCCAACAAGCCTATCGCCGCGA
TCACCGCCGATCTCGCCAGTGAATCGAGTCTCGAAGCCCTGTTCGATGGCCTGACGCAAGCCCCTAAAACCGTGATCCAC
TGTGCGGGCAGCGGCTACTTTGGTGCGATTGAAACCCAAGGGGCGAGCGATATCCACAGCCTGCTCAATAACAATGTCAC
CTCGACGATTTTGTTAGTGCGCGAGCTAGTGAAACGCTATAAAGATCAAGCGGTCACTGTGGTTGTGGTCATGTCCACCG
CAGCGCTTGCCGCCAAAGCAGGAGAATCCACTTACTGCGCGGCAAAATGGGCGGTGCGGGGATTTATCGAGTCGGTGCGA
TTAGAGCTGAAACAAAGCCCAATGAAGTTGATTGCCGTGTATCCCGGCGGCATGGATACAGGCTTTTGGCCAAGTAGTGG
TAAAACATTAGATACCACAAGCTTTATGTCCGCCGATGAAGCCGCAGGCATGCTCAAGCAAGCCTTAGTTGCCACCCAGC
ACGGTTATATCGCCGATATCACCATACAAAGAGCCTAG

Upstream 100 bases:

>100_bases
GCTATTCACCTTAATCTAACCGCTCGCCTTATCATGAATTGAAGCGCACTTGAGTTTAAGCTGCGGTTTTCAAGCAAAGG
CAGCATTAACCGAGGTCACT

Downstream 100 bases:

>100_bases
CCCTAGCCGAAACTGAGGTTAGCGGATTGAGCAAAACAGCTTCGAGACGCAGGATAGCGGCACCTCGAACCTGAGTGATC
CGCTTGCTAGTCAGCGCAAT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MILITGASSGLGAALASLYAKENEPLTLTGRNAERLQTVANALTPFSNKPIAAITADLASESSLEALFDGLTQAPKTVIH
CAGSGYFGAIETQGASDIHSLLNNNVTSTILLVRELVKRYKDQAVTVVVVMSTAALAAKAGESTYCAAKWAVRGFIESVR
LELKQSPMKLIAVYPGGMDTGFWPSSGKTLDTTSFMSADEAAGMLKQALVATQHGYIADITIQRA

Sequences:

>Translated_225_residues
MILITGASSGLGAALASLYAKENEPLTLTGRNAERLQTVANALTPFSNKPIAAITADLASESSLEALFDGLTQAPKTVIH
CAGSGYFGAIETQGASDIHSLLNNNVTSTILLVRELVKRYKDQAVTVVVVMSTAALAAKAGESTYCAAKWAVRGFIESVR
LELKQSPMKLIAVYPGGMDTGFWPSSGKTLDTTSFMSADEAAGMLKQALVATQHGYIADITIQRA
>Mature_225_residues
MILITGASSGLGAALASLYAKENEPLTLTGRNAERLQTVANALTPFSNKPIAAITADLASESSLEALFDGLTQAPKTVIH
CAGSGYFGAIETQGASDIHSLLNNNVTSTILLVRELVKRYKDQAVTVVVVMSTAALAAKAGESTYCAAKWAVRGFIESVR
LELKQSPMKLIAVYPGGMDTGFWPSSGKTLDTTSFMSADEAAGMLKQALVATQHGYIADITIQRA

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71994600, Length=194, Percent_Identity=35.5670103092784, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=198, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=199, Percent_Identity=29.6482412060301, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=201, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=200, Percent_Identity=29, Blast_Score=63, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=193, Percent_Identity=30.5699481865285, Blast_Score=63, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=242, Percent_Identity=28.5123966942149, Blast_Score=73, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=31.6582914572864, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24651139, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357041, Length=209, Percent_Identity=29.6650717703349, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397609, Length=222, Percent_Identity=26.5765765765766, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571526, Length=200, Percent_Identity=31, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23643; Mature: 23643

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILITGASSGLGAALASLYAKENEPLTLTGRNAERLQTVANALTPFSNKPIAAITADLAS
CEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHEEEHHHCC
ESSLEALFDGLTQAPKTVIHCAGSGYFGAIETQGASDIHSLLNNNVTSTILLVRELVKRY
CHHHHHHHHHHHHCCHHEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KDQAVTVVVVMSTAALAAKAGESTYCAAKWAVRGFIESVRLELKQSPMKLIAVYPGGMDT
HCCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
GFWPSSGKTLDTTSFMSADEAAGMLKQALVATQHGYIADITIQRA
CCCCCCCCEECHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MILITGASSGLGAALASLYAKENEPLTLTGRNAERLQTVANALTPFSNKPIAAITADLAS
CEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHEEEHHHCC
ESSLEALFDGLTQAPKTVIHCAGSGYFGAIETQGASDIHSLLNNNVTSTILLVRELVKRY
CHHHHHHHHHHHHCCHHEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KDQAVTVVVVMSTAALAAKAGESTYCAAKWAVRGFIESVRLELKQSPMKLIAVYPGGMDT
HCCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
GFWPSSGKTLDTTSFMSADEAAGMLKQALVATQHGYIADITIQRA
CCCCCCCCEECHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]