| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is accB [H]
Identifier: 160877085
GI number: 160877085
Start: 4685857
End: 4686306
Strand: Direct
Name: accB [H]
Synonym: Sbal195_3981
Alternate gene names: 160877085
Gene position: 4685857-4686306 (Clockwise)
Preceding gene: 160877084
Following gene: 160877086
Centisome position: 87.63
GC content: 49.11
Gene sequence:
>450_bases ATGGCAATGGATCTTCGTAAAATTAAAAAACTCATTGAGTTAGTACAAGAATCTGACATAGCAGAACTGGCGATCACCGA AGGTGAAGAGTCGATTCGCATCACTCGCTACAGCCCTATGCCAGCCAATGTGCAGTCATCGCAAACGCTACCTACAGCAC GCGTGGCACCTTTAAATACACAGGCAAAGCAAACTGCCGTTTCGCCAAGTGTGGAAGGTTTTGTGCAAGTCTCACCTATG GTTGGCACTTTCTACGCGGCGGCAGAACTCGATGATGTGCCGCTGGTTAAAGTCGGCCAAAAGGTAAGCCAAGGTGAAGT TGTCTGCATTATCGAAGCGATGAGAATGATGAATCCCATCCAAGCCGAGCGCGATGGCGTGGTCAGCGCTATTTGGGCCA AAGACGGCGATGAAGTGGCATTCGATCAGCCGCTATTCACCTTAATCTAA
Upstream 100 bases:
>100_bases TCGGTTCTCAGGGTTATGAGTTTGCACTGGCGGCAGCCATTAAGCGGCTCAACCAGCCACTGTAATCCCATTCAATAGCG TGCTTCGCAAGGGCAGATAA
Downstream 100 bases:
>100_bases CCGCTCGCCTTATCATGAATTGAAGCGCACTTGAGTTTAAGCTGCGGTTTTCAAGCAAAGGCAGCATTAACCGAGGTCAC TATGATATTAATTACCGGCG
Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]
Alternate protein names: BCCP [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAMDLRKIKKLIELVQESDIAELAITEGEESIRITRYSPMPANVQSSQTLPTARVAPLNTQAKQTAVSPSVEGFVQVSPM VGTFYAAAELDDVPLVKVGQKVSQGEVVCIIEAMRMMNPIQAERDGVVSAIWAKDGDEVAFDQPLFTLI
Sequences:
>Translated_149_residues MAMDLRKIKKLIELVQESDIAELAITEGEESIRITRYSPMPANVQSSQTLPTARVAPLNTQAKQTAVSPSVEGFVQVSPM VGTFYAAAELDDVPLVKVGQKVSQGEVVCIIEAMRMMNPIQAERDGVVSAIWAKDGDEVAFDQPLFTLI >Mature_148_residues AMDLRKIKKLIELVQESDIAELAITEGEESIRITRYSPMPANVQSSQTLPTARVAPLNTQAKQTAVSPSVEGFVQVSPMV GTFYAAAELDDVPLVKVGQKVSQGEVVCIIEAMRMMNPIQAERDGVVSAIWAKDGDEVAFDQPLFTLI
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789653, Length=159, Percent_Identity=45.9119496855346, Blast_Score=128, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001249 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 16221; Mature: 16090
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDLRKIKKLIELVQESDIAELAITEGEESIRITRYSPMPANVQSSQTLPTARVAPLNT CCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC QAKQTAVSPSVEGFVQVSPMVGTFYAAAELDDVPLVKVGQKVSQGEVVCIIEAMRMMNPI CHHHHHCCCCCCCEEEECCHHHHEEHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCC QAERDGVVSAIWAKDGDEVAFDQPLFTLI CCCCCCCEEEEECCCCCCEEECCCHHHCC >Mature Secondary Structure AMDLRKIKKLIELVQESDIAELAITEGEESIRITRYSPMPANVQSSQTLPTARVAPLNT CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC QAKQTAVSPSVEGFVQVSPMVGTFYAAAELDDVPLVKVGQKVSQGEVVCIIEAMRMMNPI CHHHHHCCCCCCCEEEECCHHHHEEHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCC QAERDGVVSAIWAKDGDEVAFDQPLFTLI CCCCCCCEEEEECCCCCCEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]
Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]
General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]