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The map label for this gene is yddQ [H]

Identifier: 160877068

GI number: 160877068

Start: 4668737

End: 4669432

Strand: Reverse

Name: yddQ [H]

Synonym: Sbal195_3964

Alternate gene names: 160877068

Gene position: 4669432-4668737 (Counterclockwise)

Preceding gene: 160877069

Following gene: 160877067

Centisome position: 87.32

GC content: 50.0

Gene sequence:

>696_bases
ATGAAAAAAGTAGCAATATGCAGTGCTCTGGCACTTTCGATGGCGAGTGCAACGGCCAGCGCAGAGGCAAGCAATAAAGT
ATCAGCACCGACAATCCGCACCATGACTCAGGCGCAAGCGCCAACGGAACTGAATGCGAACACGACAGCTGTATTGGTGA
TTGATTTTCAAAACGAATATTTCACTGGCAGCATGCCGATCCCGAACGGCAAGCAAGCGTTGGGCAAAGCCAAGCAAGTG
GTTAAATTTGCGCACCAGAATGCGATGCCAGTTTATTTTGTGCGTCATTTAGGACCAGCTGCTGGGCCACTATTTGCGGA
AGGCAGCGTTAACGCTGAGTTTCATCAGGATCTACAACCGCTAGAAATTGATTTTGTTATCAATAAGGCGACGCCGAGTT
CGTTTGTGGGAACTAATCTTGATCAGCAACTGAAAGAGAAGGGCATCAAAACACTGGTGATTACTGGGCTGATGACGCAC
ATGTGCGTGTCGAGCACGGCGCGTGATGCTGTGCCTATGGGTTATGATGTGATCATTGCAGAAGACGCCACCGCCACTCG
CGATCTGGCAACTTGGGACGGATCTATCGTAGATCACGCCACGCTGCAACGTGCTGCAATAGCGGGTGTTGCCGATGTTT
TTGCTGAGATTAAAACTACTCAAGCGGTGCTCAACATGCCAGTGGTGCGACTGTAA

Upstream 100 bases:

>100_bases
TCGTCACAAAGCCGCCTATTCGTATCGTTAAGTGCTCTGCATAATGCCCGCATCACTTGGCAATACGGCCCGTGACACAG
AATATGCAAGGATATTTGCG

Downstream 100 bases:

>100_bases
CGGCCAACAAGTGCAAGATACCCGTTAATACATAAATGAGTATTAGCTGGTATCTTTGAGTGAGCGACATTAAGGATAGT
TTGAGCCGACGATGATAAAT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKKVAICSALALSMASATASAEASNKVSAPTIRTMTQAQAPTELNANTTAVLVIDFQNEYFTGSMPIPNGKQALGKAKQV
VKFAHQNAMPVYFVRHLGPAAGPLFAEGSVNAEFHQDLQPLEIDFVINKATPSSFVGTNLDQQLKEKGIKTLVITGLMTH
MCVSSTARDAVPMGYDVIIAEDATATRDLATWDGSIVDHATLQRAAIAGVADVFAEIKTTQAVLNMPVVRL

Sequences:

>Translated_231_residues
MKKVAICSALALSMASATASAEASNKVSAPTIRTMTQAQAPTELNANTTAVLVIDFQNEYFTGSMPIPNGKQALGKAKQV
VKFAHQNAMPVYFVRHLGPAAGPLFAEGSVNAEFHQDLQPLEIDFVINKATPSSFVGTNLDQQLKEKGIKTLVITGLMTH
MCVSSTARDAVPMGYDVIIAEDATATRDLATWDGSIVDHATLQRAAIAGVADVFAEIKTTQAVLNMPVVRL
>Mature_231_residues
MKKVAICSALALSMASATASAEASNKVSAPTIRTMTQAQAPTELNANTTAVLVIDFQNEYFTGSMPIPNGKQALGKAKQV
VKFAHQNAMPVYFVRHLGPAAGPLFAEGSVNAEFHQDLQPLEIDFVINKATPSSFVGTNLDQQLKEKGIKTLVITGLMTH
MCVSSTARDAVPMGYDVIIAEDATATRDLATWDGSIVDHATLQRAAIAGVADVFAEIKTTQAVLNMPVVRL

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=162, Percent_Identity=32.7160493827161, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081820, Length=83, Percent_Identity=40.9638554216867, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24544; Mature: 24544

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAICSALALSMASATASAEASNKVSAPTIRTMTQAQAPTELNANTTAVLVIDFQNEY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCE
FTGSMPIPNGKQALGKAKQVVKFAHQNAMPVYFVRHLGPAAGPLFAEGSVNAEFHQDLQP
EECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCHHHHCCCCC
LEIDFVINKATPSSFVGTNLDQQLKEKGIKTLVITGLMTHMCVSSTARDAVPMGYDVIIA
EEEEEEEECCCCCCHHCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEEE
EDATATRDLATWDGSIVDHATLQRAAIAGVADVFAEIKTTQAVLNMPVVRL
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKVAICSALALSMASATASAEASNKVSAPTIRTMTQAQAPTELNANTTAVLVIDFQNEY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCE
FTGSMPIPNGKQALGKAKQVVKFAHQNAMPVYFVRHLGPAAGPLFAEGSVNAEFHQDLQP
EECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCHHHHCCCCC
LEIDFVINKATPSSFVGTNLDQQLKEKGIKTLVITGLMTHMCVSSTARDAVPMGYDVIIA
EEEEEEEECCCCCCHHCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEEE
EDATATRDLATWDGSIVDHATLQRAAIAGVADVFAEIKTTQAVLNMPVVRL
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]