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The map label for this gene is glxA [H]

Identifier: 160877067

GI number: 160877067

Start: 4667638

End: 4668645

Strand: Reverse

Name: glxA [H]

Synonym: Sbal195_3963

Alternate gene names: 160877067

Gene position: 4668645-4667638 (Counterclockwise)

Preceding gene: 160877068

Following gene: 160877065

Centisome position: 87.31

GC content: 49.8

Gene sequence:

>1008_bases
ATGATAAATACGATGAACCAGAGTGAGATAGAAACAGCTTCAAAAGTGACCATAGCCATAGTGGTCTTTGATGGGATCAT
TCCATTTCATCTGTCAGTTCCCTATGAAGTCTTTGAAAAAGTGCTCAAGGCCGATGGCACGCCCGCCTGCGAAATCACCA
TCTGCGCCGCCACACCCGGAATACTCAAAACCAGCGCAGGCTTCTCGATGATAGTAGAAAAGGGGCTGGATGAATTAAGC
TCAAAAGACATCATCATAGTGCCGAGTTGGGATGATCCTGCACACGAGCCAGAAACCTGTATTATTAATGCCTTGCAGCA
AGCGCACGCCAATGGATCGCGCATCATAGGCCTGTGCATGGGCGCTTTTGTTGTGGCTGCCGCAGGATTACTCGACGGAC
GTTCCGCCACCACCCATTGGCGCTGGGCACAATGTTTCCGTAATCTGCACACGAATGTGTTTGTCGATGAGAAGGTGCTG
TATATCGATAATGGAGATGTGGTGACTTCTGCGGGCACTGCCGCGAGTATTGATTGCTGCTTGTATATCGTTCGGCAAAT
GTGGGGATCTGAAACGGCTAACGCAGTCGCTCGCCATCTCGTTGTGCCACCGCACCGCCAAGGTGGTCAGGCTCAATACA
TAGATATTCCCGTTCCAGCCGTTAATCAGCGCGAGCCTTTATCCGCTATCATGGATTGGGCGATAGCAAATATTGCATCG
CCGCTGACGGTTGACACTATGGCTGAGAAAGCCTGCATCAGTCGCCGCCATTTTACTCGGCGTTTTCAACAAGCCACAGG
TACCAGCTTTTCACTCTGGTTGGTTAATCAACGGCTTATTATGGTGAAACGATATTTAGAAACGACAGACCACTCCATCG
ACCGCATCGCCGAACAAGCCGGTTTCGCTTCCACTACCTCACTTCGGCGCCATTTCCGTCAACAGTTTGATATTTCCCCA
TCGAATTACCGATTTGTATTTAGGGGAAAGAGTAAGGCTAGCGAATGA

Upstream 100 bases:

>100_bases
CGACTGTAACGGCCAACAAGTGCAAGATACCCGTTAATACATAAATGAGTATTAGCTGGTATCTTTGAGTGAGCGACATT
AAGGATAGTTTGAGCCGACG

Downstream 100 bases:

>100_bases
AAGTTGTTTCATCATTAAAATCAGCACTAACTTTGATGTGATGACTTATCAAGGTTTAGGTGAGTCACTAACCCCCCGTT
GTTTTAACAGACTGAACTTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MINTMNQSEIETASKVTIAIVVFDGIIPFHLSVPYEVFEKVLKADGTPACEITICAATPGILKTSAGFSMIVEKGLDELS
SKDIIIVPSWDDPAHEPETCIINALQQAHANGSRIIGLCMGAFVVAAAGLLDGRSATTHWRWAQCFRNLHTNVFVDEKVL
YIDNGDVVTSAGTAASIDCCLYIVRQMWGSETANAVARHLVVPPHRQGGQAQYIDIPVPAVNQREPLSAIMDWAIANIAS
PLTVDTMAEKACISRRHFTRRFQQATGTSFSLWLVNQRLIMVKRYLETTDHSIDRIAEQAGFASTTSLRRHFRQQFDISP
SNYRFVFRGKSKASE

Sequences:

>Translated_335_residues
MINTMNQSEIETASKVTIAIVVFDGIIPFHLSVPYEVFEKVLKADGTPACEITICAATPGILKTSAGFSMIVEKGLDELS
SKDIIIVPSWDDPAHEPETCIINALQQAHANGSRIIGLCMGAFVVAAAGLLDGRSATTHWRWAQCFRNLHTNVFVDEKVL
YIDNGDVVTSAGTAASIDCCLYIVRQMWGSETANAVARHLVVPPHRQGGQAQYIDIPVPAVNQREPLSAIMDWAIANIAS
PLTVDTMAEKACISRRHFTRRFQQATGTSFSLWLVNQRLIMVKRYLETTDHSIDRIAEQAGFASTTSLRRHFRQQFDISP
SNYRFVFRGKSKASE
>Mature_335_residues
MINTMNQSEIETASKVTIAIVVFDGIIPFHLSVPYEVFEKVLKADGTPACEITICAATPGILKTSAGFSMIVEKGLDELS
SKDIIIVPSWDDPAHEPETCIINALQQAHANGSRIIGLCMGAFVVAAAGLLDGRSATTHWRWAQCFRNLHTNVFVDEKVL
YIDNGDVVTSAGTAASIDCCLYIVRQMWGSETANAVARHLVVPPHRQGGQAQYIDIPVPAVNQREPLSAIMDWAIANIAS
PLTVDTMAEKACISRRHFTRRFQQATGTSFSLWLVNQRLIMVKRYLETTDHSIDRIAEQAGFASTTSLRRHFRQQFDISP
SNYRFVFRGKSKASE

Specific function: May Be A Transcriptional Activator Of Genes Involved In The Multiple Antibiotic Resistance (Mar) Phenotype. It Can Also Activate Genes Such As Soda, Zwf And Micf. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081928, Length=107, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37000; Mature: 37000

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTMNQSEIETASKVTIAIVVFDGIIPFHLSVPYEVFEKVLKADGTPACEITICAATPG
CCCCCCHHHHHHHCCEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCC
ILKTSAGFSMIVEKGLDELSSKDIIIVPSWDDPAHEPETCIINALQQAHANGSRIIGLCM
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
GAFVVAAAGLLDGRSATTHWRWAQCFRNLHTNVFVDEKVLYIDNGDVVTSAGTAASIDCC
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCEEECCCCCHHHHHH
LYIVRQMWGSETANAVARHLVVPPHRQGGQAQYIDIPVPAVNQREPLSAIMDWAIANIAS
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLTVDTMAEKACISRRHFTRRFQQATGTSFSLWLVNQRLIMVKRYLETTDHSIDRIAEQA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
GFASTTSLRRHFRQQFDISPSNYRFVFRGKSKASE
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MINTMNQSEIETASKVTIAIVVFDGIIPFHLSVPYEVFEKVLKADGTPACEITICAATPG
CCCCCCHHHHHHHCCEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCCC
ILKTSAGFSMIVEKGLDELSSKDIIIVPSWDDPAHEPETCIINALQQAHANGSRIIGLCM
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
GAFVVAAAGLLDGRSATTHWRWAQCFRNLHTNVFVDEKVLYIDNGDVVTSAGTAASIDCC
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCEEECCCCCHHHHHH
LYIVRQMWGSETANAVARHLVVPPHRQGGQAQYIDIPVPAVNQREPLSAIMDWAIANIAS
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLTVDTMAEKACISRRHFTRRFQQATGTSFSLWLVNQRLIMVKRYLETTDHSIDRIAEQA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
GFASTTSLRRHFRQQFDISPSNYRFVFRGKSKASE
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]