| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877059
Identifier: 160877059
GI number: 160877059
Start: 4660106
End: 4661374
Strand: Reverse
Name: 160877059
Synonym: Sbal195_3955
Alternate gene names: NA
Gene position: 4661374-4660106 (Counterclockwise)
Preceding gene: 160877060
Following gene: 160877058
Centisome position: 87.17
GC content: 50.2
Gene sequence:
>1269_bases TTGTTTGCCGCCAAGCCATTTGAACAACTGATGCAATTGCCTGCTGCCGTGCGGCAATATTTGTTGATCACCTTCAATTA TTGGAGTTTTACCTTAACCGATGGCGCACTGCGGATGTTAGTGGTGCTGCATTTTCACGATCTTGGCTACAGTCCGCTGG CGATCGCTATGCTGTTTTTGTTCTACGAGATTTTTGGCGTAGTGACCAATCTGATTGGCGGCTGGCTAGGGGCGCGTTTA GGGTTAAATCGCACCATGAACTTGGGCCTTGGGATGCAAGTGTTTGCCTTAGCCATGTTGTTAGTGCCGGCGGCGAGTTT ACCTTTGTGGCTTGCTGGCGTTCCTTGGGTGATGGCGGCGCAGGCTTTATCTGGGATCGCTAAAGATCTCAATAAGATGA GTGCCAAAAGCGCGATAAAACTACTGGTGCCAAAAGGCGAGCAGGGCAAACTTTACCAGTGGGTTGCGTTATTAACAGGG TCTAAAAATGCCCTCAAGGGCGCGGGATTTTTCCTCGGCGGCGCCTTGCTTGCCTTGCTCGGGTTTGAGCTGGCGATCGC CGCTATGGCGCTCATGCTTGGACTCGTCTGGTTACTCAGTTTAGTGATGCTGAAAAAGGATTTAGGTAAAGCCAAGAATA AGCCTAAATTTACGGAGATTTTCTCTAAGAGTCGCAGCGTAAACATTCTCTCGGCGGCGCGATTATTCCTGTTTGCTGCC AGAGATGTGTGGTTTGTGGTGGCGCTACCCGTGTATTTGGCCAGCCAATTAGGCTGGGATCATTGGGCTGTGGGCGGCTT TTTAGCTGTGTGGGTTATCGGTTACGGCATAGTGCAAACCTTAGCACCTAAGATCACGGGTAATCGCCAAGCCCAAAGTC AGTTAACTGATACAGCCCCCGATGGTCGCAGCGCGTTAATTTGGGCCAGTATGTTGGCCTTTGTGCCCGCGCTGATTGCC AGCGCGATACAGTTCAGTTTTTATCCTGAAGCAAGTTTGCTACTGGGTCTCATGTTGTTTGGCGCCCTGTTTGCGGTGAA CTCATCGCTGCACAGTTACTTGATTGTGAGTTACGCCAGTGAAGATGCGGTGTCGCTGGATGTGGGTTTCTACTATATGG CCAATGCTATGGGGCGTTTAGTCGGCACTGTGCTGTCTGGCTTAGTGTATCAAGCCTATGGTTTAGCTGCCTGTTTGTGG ATTTCGACCGCTTTTATCGGCATCACTGCTATGATTTCGATTAAGTTACCTCGGCAAGCTGTGGAATAA
Upstream 100 bases:
>100_bases CTCTATGTGTGGTACGACAATGAATGGGGCTACGCTAACCGTACGGCTGAGCTTGCCCGTTTAGTCGGCCAGCTTGATTT GCCGCACTAGGAGAGCTCAA
Downstream 100 bases:
>100_bases GTGCTAATGCAAAAGCGGCCTAAGACATCAAAACATAACTCTAAAGGTGCGTGTCTGCGGCGTTTTGGGCGCAGCCTATG TATGAGTTTAGGCTTGTGCT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYQWVALLTG SKNALKGAGFFLGGALLALLGFELAIAAMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAQSQLTDTAPDGRSALIWASMLAFVPALIA SAIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQAVE
Sequences:
>Translated_422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYQWVALLTG SKNALKGAGFFLGGALLALLGFELAIAAMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAQSQLTDTAPDGRSALIWASMLAFVPALIA SAIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQAVE >Mature_422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYQWVALLTG SKNALKGAGFFLGGALLALLGFELAIAAMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAQSQLTDTAPDGRSALIWASMLAFVPALIA SAIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQAVE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45656; Mature: 45656
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFL CCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH FYEIFGVVTNLIGGWLGARLGLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAA HHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHH QALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYQWVALLTGSKNALKGAGFFLGGALLALL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GFELAIAAMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAQSQLTDTAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC DGRSALIWASMLAFVPALIASAIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYAS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC EDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLWISTAFIGITAMISIKLPRQA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHH VE CC >Mature Secondary Structure MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFL CCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH FYEIFGVVTNLIGGWLGARLGLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAA HHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHH QALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYQWVALLTGSKNALKGAGFFLGGALLALL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GFELAIAAMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAQSQLTDTAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC DGRSALIWASMLAFVPALIASAIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYAS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC EDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLWISTAFIGITAMISIKLPRQA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHH VE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA