Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is mlhB [H]
Identifier: 160876985
GI number: 160876985
Start: 4574311
End: 4575222
Strand: Reverse
Name: mlhB [H]
Synonym: Sbal195_3881
Alternate gene names: 160876985
Gene position: 4575222-4574311 (Counterclockwise)
Preceding gene: 160876986
Following gene: 160876984
Centisome position: 85.56
GC content: 48.9
Gene sequence:
>912_bases ATGCCAAGCTGGCAAGCATCTGTACTGAATACTATTTTATCTTATGTTGCTAGGCCATCCATCAGTCGCGGCAAGGCCAA AGTTCCCCTAGCGCAAGTGCGTAAAAAGTTGCTTGATCTCGATAAACGTTGGCTTCCTTGGCCGGATAAGTTAGTTAGTG CCACCATCCCTTTGCAACACTCTAGCTTGCTGCACTATGTGCTTCTCAATGAGCAAACTCGCCTTGGCAATCTGTTTTAT ATCCGAGGCGGAGGTTTTTGTTTTAAAACGCCCCATGCCCACGCAAGATTGATCGCGGATATTAGCCAACGTTGTAAATT GGATGCCTATATTCCTGATTATCGTCTCGCACCTGAGCATCCTTTTCCTGCGCCATTTGATGATGTGCTTGAAGCCTATA AGCGATTAATCGCGCTTAAGGGCGATGAGAATGTGATCCTCATGGGCGACTCTGCTGGCGGCAATTTAGCCCTGAGTTTG TTGCTGGAATTAAAGCGTTTAGCCCTGCCTTTGCCGACGGCCTGTATCTTGTTATCGCCCGCGTTGGATTTAGCACTAAC CGGAGATACTGAGCTGATACTCGCGGCTGACGATCCCTTCTTCACCATCGAAGCTTTGCTGCGTTTACGTGGCGCTTATC TTGGGGGGGCCGACCCCATGTCAGCAAAAGTATCACCCTTGCAGGGGGACTTGGCAGATCTGCCGCCTATCTTAGTGATT GCGGGTACGCGGGAGCTGTTATTGCAGGATTCTGAGCGCTTAGTCGCTCAAGTCAAAGCCAGCGGTGGCGATATAACGGG CTGTTTTTACCCTAACATGCCCCATGTGTTTCCCTTGTTCAATTTATTGCCTGAAGCCCTTGAAGTGAGGTCGAAAATTA GCCATTTTGTGCTTTCACACTTGATTCGTTAA
Upstream 100 bases:
>100_bases CTGCGCTTAAAAGCACAGAATTATAGGAAGTTAGATCTGCTGTAGTCCACGACCTGCGACTTGAGCGTCGGGATGGCGGC GTTTAAGTAGAGGAAGGGAT
Downstream 100 bases:
>100_bases AATGGTGTAGTTATTCACATTCAGTGAATAGCTAGCAAAATGAGGGGTAAATAACTTTTTTTCTGACTAATTATGCTGAA AGCCACGGGCATAACCGCTT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNEQTRLGNLFY IRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGDENVILMGDSAGGNLALSL LLELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLGGADPMSAKVSPLQGDLADLPPILVI AGTRELLLQDSERLVAQVKASGGDITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR
Sequences:
>Translated_303_residues MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNEQTRLGNLFY IRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGDENVILMGDSAGGNLALSL LLELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLGGADPMSAKVSPLQGDLADLPPILVI AGTRELLLQDSERLVAQVKASGGDITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR >Mature_302_residues PSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNEQTRLGNLFYI RGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGDENVILMGDSAGGNLALSLL LELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLGGADPMSAKVSPLQGDLADLPPILVIA GTRELLLQDSERLVAQVKASGGDITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533412, Length=145, Percent_Identity=30.3448275862069, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115533410, Length=145, Percent_Identity=30.3448275862069, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 33319; Mature: 33188
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCH SSLLHYVLLNEQTRLGNLFYIRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCEECCCCCCCCCCCCC PFPAPFDDVLEAYKRLIALKGDENVILMGDSAGGNLALSLLLELKRLALPLPTACILLSP CCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC ALDLALTGDTELILAADDPFFTIEALLRLRGAYLGGADPMSAKVSPLQGDLADLPPILVI CCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEE AGTRELLLQDSERLVAQVKASGGDITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSH ECCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC >Mature Secondary Structure PSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQH CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCH SSLLHYVLLNEQTRLGNLFYIRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCEECCCCCCCCCCCCC PFPAPFDDVLEAYKRLIALKGDENVILMGDSAGGNLALSLLLELKRLALPLPTACILLSP CCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC ALDLALTGDTELILAADDPFFTIEALLRLRGAYLGGADPMSAKVSPLQGDLADLPPILVI CCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEE AGTRELLLQDSERLVAQVKASGGDITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSH ECCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA