Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160876986
Identifier: 160876986
GI number: 160876986
Start: 4575278
End: 4576423
Strand: Reverse
Name: 160876986
Synonym: Sbal195_3882
Alternate gene names: NA
Gene position: 4576423-4575278 (Counterclockwise)
Preceding gene: 160876987
Following gene: 160876985
Centisome position: 85.58
GC content: 47.38
Gene sequence:
>1146_bases GTGGCGATTTCGGTTGCGGGCGGTGTAAGACCCGGCAAAATTATAGAGATAGAGCACAGACTCTATCAGCAATTGATCCT CGGAAAGCATAAAGCGAGCCCGACTCTTTTGGATGATCTCGACCTTGAATTAGAGGCCGATGCGAATAAGTTAGATGTTG AGCGCGAAGCGATTTTAGCGCGTTTGATGAAACAAATTAAAGCCAAAGAAGTGTTCGAAGCCGTGTCGAGCCAGCTGCAT GAAACGGTCAATAACGCCATCGAGCATCAACTCGCGTCCCCCGAACTGGTTCTGGCTAAGTCAGAGATCAATGAATCGCA AATTCTGTTGCTGGAATTACTGCTGGCAAAAAATCTTGATGCGACGCGATTAAGACCGCTGATCAGTAACTTAAGTTGGT TGTGCCGCGACTTAACCAATATGGTCAACAGCCCGTCTTTTCGTGCCCGCCGGCCTCAGAGCTCAGATGTGCGAGTCACT GATATTAAATTGGTGATGAATTACATCGGCATCGAAAACCTGCGAACGATTATTCCTTACTTTTGCCTGCGTAATTGGCT GCCGAGCGCCAATGCTAAGTTGTTGTGGACTACCCGTAAATTGTGGCGCTACAGCATAGTCAGTGGTATCGCGGCCAATG CGTTGGCTCAGCTTCATAATACTGACTCAGCCTTAGTTTATAGTAGTGCCTTACTCAATCAATTAGGCACCTCGGTTGTG CTGAGTTTGAGCGCGCGCTTATTCGATCAAACCTGGGGAGCGTGGATAAGGGAAGCCAGCAGCAGCCGTGACAAGGAAGT GTATGACGCGGTGATTGCCACTGAGTTTCCGGCCAAAGCGGTGTTTGAACAAGTGTTAAGCCATGGTCATAAACTTAACT GGCAGCTATTAGAGTTACTTAAGTTTGAAGCGAGCCCTTTGACTGGGTTATTGAAGGAGTTAGACCTGACCTTAAGCTAT CGAGAATTGTCACCGCAGGCCGCATTAGTCGCGCGGGCAAACTGTTATGCTAAGGTGGTGTTGCTCGAAGAAATGCGTCA AATCGATCCCCAAGAAAAGCGTTTAATGTTCGATTATTACGAGTTAACTGAGCAAGAAGTGCTGCGCTTAAAAGCACAGA ATTATAGGAAGTTAGATCTGCTGTAG
Upstream 100 bases:
>100_bases TTATTGCTAAGATTAAGTGTATGTGCTGAAATTGTAATGATTTTGAGAGTTTGATTGTTTTGACGTCACTCGGGCATTAG CGATATAGGAAAGATTTATA
Downstream 100 bases:
>100_bases TCCACGACCTGCGACTTGAGCGTCGGGATGGCGGCGTTTAAGTAGAGGAAGGGATATGCCAAGCTGGCAAGCATCTGTAC TGAATACTATTTTATCTTAT
Product: putative signal transduction protein
Products: NA
Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL
Sequences:
>Translated_381_residues MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL >Mature_380_residues AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLHE TVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTD IKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVVL SLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSYR ELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43257; Mature: 43125
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA CEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELTEQEVLRLKAQNYRKLDLL HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA EEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELTEQEVLRLKAQNYRKLDLL HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA