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The map label for this gene is ybeQ [H]

Identifier: 160876976

GI number: 160876976

Start: 4564757

End: 4565536

Strand: Reverse

Name: ybeQ [H]

Synonym: Sbal195_3872

Alternate gene names: 160876976

Gene position: 4565536-4564757 (Counterclockwise)

Preceding gene: 160876981

Following gene: 160876974

Centisome position: 85.38

GC content: 48.97

Gene sequence:

>780_bases
GTGAAATACAGATTATGGGTTTTAGGTGCAGGTTTAAGCTTAACGATCGGGCTGAGCTCTGCGGCGCACGCATTTTCTAT
CCCGCAGCCTGCTGCCGAACTCGCGGCCAGTAAGTTTGTGCATATTCAGGTGACGGCAGAACAAGGCGACGCTGATGCCC
AATTTCTGCTGGGATTAATGTATCTCTCTGGGCGTTTTGTGGAGCAAGAAGTGCCCTCTGGTTTGCATTGGATTTCACTT
GCCGCCGAGCAGCAACATGAAAAAGCCCAGCAAACCTTAGCCGACCTGTCTTTTGAAGGCCAATTGATCAAACGTGACTT
ATCCGTGGCCGAGCATTGGTATCGAGCCTTGAGTGAGCAGGGTAGTCGTTGGGCACAATTCCGTTTGGGCTTTATTTATG
CCTCTGGCGGCGATGGGGTGCAGCGCAACTGCGGTAAAGCGGTCGAGCAATTTTCCCAAGTGGGTGATGATATTGCATTA
GGTAATGTGGCGTGGATTTTAGCGACTTGCCCCGAAGCTGAGTATCGCGATGGCAATAAAGCGGTCGAGTTATCCTTAAA
GTTACTCAAAGTGAATGAAAACGATCCGACAAATTTAGATAATCTGGCGGCGGCTTATGCCGAAGTCGGCGATTTTGGTG
CGGCAATTTCGACGCAACAAAAAGCGATTGAAGCGTTAAAGATGAGCGCCGAAATGACCAAGACAGATGAATTTATGCAG
CGTTTACAAACCTACGAGCAAAAGCGTGCGTATCGCGAAACCTTACGTTTACTCGAATAA

Upstream 100 bases:

>100_bases
ACTTCCCCCATTATCCTGAGGTTTGTGTGTATTTAGGCTCGACTTATGGGGTTAATTCTGGCTAACTTTGTGGGCAGTCG
CTTTTAAGAGAGGTAAGCAA

Downstream 100 bases:

>100_bases
GGCATTGTTTATTGGATCGGTTTAATTAAGCTCCATTGGTTTATTCATGTGTTAATTGATGCATAGATTTATAAGTTGAA
AATAAAGCCTGAGTGGATAC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKYRLWVLGAGLSLTIGLSSAAHAFSIPQPAAELAASKFVHIQVTAEQGDADAQFLLGLMYLSGRFVEQEVPSGLHWISL
AAEQQHEKAQQTLADLSFEGQLIKRDLSVAEHWYRALSEQGSRWAQFRLGFIYASGGDGVQRNCGKAVEQFSQVGDDIAL
GNVAWILATCPEAEYRDGNKAVELSLKLLKVNENDPTNLDNLAAAYAEVGDFGAAISTQQKAIEALKMSAEMTKTDEFMQ
RLQTYEQKRAYRETLRLLE

Sequences:

>Translated_259_residues
MKYRLWVLGAGLSLTIGLSSAAHAFSIPQPAAELAASKFVHIQVTAEQGDADAQFLLGLMYLSGRFVEQEVPSGLHWISL
AAEQQHEKAQQTLADLSFEGQLIKRDLSVAEHWYRALSEQGSRWAQFRLGFIYASGGDGVQRNCGKAVEQFSQVGDDIAL
GNVAWILATCPEAEYRDGNKAVELSLKLLKVNENDPTNLDNLAAAYAEVGDFGAAISTQQKAIEALKMSAEMTKTDEFMQ
RLQTYEQKRAYRETLRLLE
>Mature_259_residues
MKYRLWVLGAGLSLTIGLSSAAHAFSIPQPAAELAASKFVHIQVTAEQGDADAQFLLGLMYLSGRFVEQEVPSGLHWISL
AAEQQHEKAQQTLADLSFEGQLIKRDLSVAEHWYRALSEQGSRWAQFRLGFIYASGGDGVQRNCGKAVEQFSQVGDDIAL
GNVAWILATCPEAEYRDGNKAVELSLKLLKVNENDPTNLDNLAAAYAEVGDFGAAISTQQKAIEALKMSAEMTKTDEFMQ
RLQTYEQKRAYRETLRLLE

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28618; Mature: 28618

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRLWVLGAGLSLTIGLSSAAHAFSIPQPAAELAASKFVHIQVTAEQGDADAQFLLGLM
CCEEEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH
YLSGRFVEQEVPSGLHWISLAAEQQHEKAQQTLADLSFEGQLIKRDLSVAEHWYRALSEQ
HHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
GSRWAQFRLGFIYASGGDGVQRNCGKAVEQFSQVGDDIALGNVAWILATCPEAEYRDGNK
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCCCCC
AVELSLKLLKVNENDPTNLDNLAAAYAEVGDFGAAISTQQKAIEALKMSAEMTKTDEFMQ
EEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQTYEQKRAYRETLRLLE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYRLWVLGAGLSLTIGLSSAAHAFSIPQPAAELAASKFVHIQVTAEQGDADAQFLLGLM
CCEEEEEEECCCEEEEECCCCHHHCCCCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH
YLSGRFVEQEVPSGLHWISLAAEQQHEKAQQTLADLSFEGQLIKRDLSVAEHWYRALSEQ
HHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
GSRWAQFRLGFIYASGGDGVQRNCGKAVEQFSQVGDDIALGNVAWILATCPEAEYRDGNK
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCCCCC
AVELSLKLLKVNENDPTNLDNLAAAYAEVGDFGAAISTQQKAIEALKMSAEMTKTDEFMQ
EEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQTYEQKRAYRETLRLLE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]