Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160876960
Identifier: 160876960
GI number: 160876960
Start: 4540018
End: 4540671
Strand: Reverse
Name: 160876960
Synonym: Sbal195_3856
Alternate gene names: NA
Gene position: 4540671-4540018 (Counterclockwise)
Preceding gene: 160876961
Following gene: 160876959
Centisome position: 84.92
GC content: 50.92
Gene sequence:
>654_bases ATGAGTGATGCAACCCAAACCGTATTAGTTGGCACTGGCGCTTTGATTGAGCTGTTACTCAAGGGCGAGTTTATTTGCCG CACCACCAATGAAGAAGGCTGGCGCGCCCTTAAAAATAGTAGCACCCGCGAGCGGGTCGAAGCCTATTTAAACCAGATTA ACCGTACCGTGGCGTCCGCCGCCGAAGGTGATGTGTTCTTCTGCGGTTATTTGCAGCTCGGCGATAGCGAACGCAAAGTG ATTTCATCGCAGTTTAAAGATATCTGTCAGGCATTGATCCCGCTGGTGGAATGGCTGGTATTAGTGCAAGAAGCTAGTGG TCAAGATGCGCCACTGAGCGAAGGCGCGCCCGTGCGTTTGACTGAGCTGCAAAGTCGCATCGAAGACACGCCGGCGTTTC GTGAACAGCTAGCCAAGCTCAGCCAATATCGTTTATTTGGCTCGACCAGTACCAACAGCGATGCGCAAATCAAGTTAGTC TTCAAACGCTTAGTCGAACTCGGCTATTTAGTACGCCCCAATGCGGAGAAGCAAATCTATATTGCCACGGGCAAGCTGGA TTATTTGTATGAAGTCATTCGGTTTATCGACGAAACCGAAGGCCTAAGCCTAGAAGCGCAGGCGGAAACCGCGACCCAGC GGGACTTAATATAA
Upstream 100 bases:
>100_bases ACATTATCAACAAACAAACCAAGAAGTTGCAGGTGGTTAAGCCTAAAGTGAACCCAATCGCCGACATGTTGAATAAGCGT TTGTCGAAGGAGGCCATCTA
Downstream 100 bases:
>100_bases TGTTGGCACTGTTAAACCTAGGTAAAAGCTGCGACCAAGGAGGCCGTGATGAGCAGTAACTTACATCAGGCGGGGGTTAA GCTGCTTAAGCAGTTAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSDATQTVLVGTGALIELLLKGEFICRTTNEEGWRALKNSSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGDSERKV ISSQFKDICQALIPLVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLV FKRLVELGYLVRPNAEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
Sequences:
>Translated_217_residues MSDATQTVLVGTGALIELLLKGEFICRTTNEEGWRALKNSSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGDSERKV ISSQFKDICQALIPLVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLV FKRLVELGYLVRPNAEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI >Mature_216_residues SDATQTVLVGTGALIELLLKGEFICRTTNEEGWRALKNSSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGDSERKVI SSQFKDICQALIPLVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLVF KRLVELGYLVRPNAEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24260; Mature: 24129
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDATQTVLVGTGALIELLLKGEFICRTTNEEGWRALKNSSTRERVEAYLNQINRTVASA CCCCCCEEEEEHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AEGDVFFCGYLQLGDSERKVISSQFKDICQALIPLVEWLVLVQEASGQDAPLSEGAPVRL CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLVFKRLVELGYLVRPNAEKQIY HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCEEE IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC >Mature Secondary Structure SDATQTVLVGTGALIELLLKGEFICRTTNEEGWRALKNSSTRERVEAYLNQINRTVASA CCCCCEEEEEHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AEGDVFFCGYLQLGDSERKVISSQFKDICQALIPLVEWLVLVQEASGQDAPLSEGAPVRL CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLVFKRLVELGYLVRPNAEKQIY HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCEEE IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA