| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876943
Identifier: 160876943
GI number: 160876943
Start: 4520153
End: 4521274
Strand: Reverse
Name: 160876943
Synonym: Sbal195_3839
Alternate gene names: NA
Gene position: 4521274-4520153 (Counterclockwise)
Preceding gene: 160876944
Following gene: 160876941
Centisome position: 84.55
GC content: 49.38
Gene sequence:
>1122_bases ATGCCGCCGACAAGATCGTCCCTGCAAATTGGGGAGCTTGCCGCAGGGCAAGCGCTCACCTTGCCTATTTACCATTTTAA GCCCAGCGACGATAAGGCGACTGGCCCCAAAGTGTATATTCAGGCCAATGTCCACGGCGCTGAAGTGCAAGGTAATGCGG TGATTTATCAGTTGATGAAGCAGCTTGAACACTGTGACATCCGCGGCGAAATCACCTTAGTGCCATTAGCCAATCCTCTT GGGATCAACCAAAAAAGTGGTGAGTTTACCCTCGGCCGATTTGACCCTATTACGGGGGCGAACTGGAATCGTGAGTATTT GAATCATGCTATCGATTTGCCGACTTGGTATAGCGAACATGCCAAGCTCAGTGATAACGAGCTGATCCAAGCCTATCGCA GTACTTTGGTTGAAGCCTGTCAGCAAAAATTACGGCATGAATGGGGCATTACAACCGGCCATAGGCTTGCGGTCAACTTG CAGATAATGGCCCATGGCGCGGATATAGTGCTCGATCTGCATACGGGGCCTAAATCCTGTAAGCATTTGTATTGTCCTGA ATATGACTTAGCTGCCGCGCAGTTTTTGTCGATCCCTTATACGCTCGTTATCCCCAATACTTTTGGTGGTGCTATGGATG AGGCAGCGTTTTGTCCTTGGTGGCAATTAAGTAATTTTGCAAAAGCGCAGGGGCGTGATTTAGCCGTTGCTGTGTCAGCG TTAACCTTGGAGTTGGCGAGCCAAGAGCGCGTCTGTCTTGAGGATGCGTTGGTTGATGCCCAAGGGATTTTGGCATATTT AAGCCACAGAGGCGTAATAGCTGAAACCGTTGCGCCCGCTAAAATGCCGCGCTTTGGTTGTTACCTTAAAGACTATAAAA AATATCACGCGCCGAGTTCAGGGTTAGTGGAATACCTCGCACCTGTGGGTGAACCACTGGCTGCGGGGCAGCCCTTAGTT AATTTACTGCGAATGGATTTATACGGTACGGCAGATGAGCTAAAGACGGTCTGTTTGCCCCAGGACTGTGTGCCTATTTT GCACTTTGCTTCGGCGTCTGTGCACCAAGGGACTGAGCTTTATAAAGTCATGACTCATGTGTTTGAGTTGCCGACGATAT AA
Upstream 100 bases:
>100_bases CAAGGCGCCAGCCCACATAACCTGTGTGTGTTAGTGGCAGAATCGGAAGCGGCGCAAGTGGTGAAATCGCTGCATCAAAA TCTGTTCGAAGGCGCTTAAT
Downstream 100 bases:
>100_bases TCGCCCGCTTAGAGCATAAGCATTAGCTCATAACATTCAGCTTATCGGACTGAGAGCAAACAACGCCAATCCTAATCGAT TGGCATTGTTGTTTTTAAGG
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine Catabolism Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase / Aspartoacylase Family
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPPTRSSLQIGELAAGQALTLPIYHFKPSDDKATGPKVYIQANVHGAEVQGNAVIYQLMKQLEHCDIRGEITLVPLANPL GINQKSGEFTLGRFDPITGANWNREYLNHAIDLPTWYSEHAKLSDNELIQAYRSTLVEACQQKLRHEWGITTGHRLAVNL QIMAHGADIVLDLHTGPKSCKHLYCPEYDLAAAQFLSIPYTLVIPNTFGGAMDEAAFCPWWQLSNFAKAQGRDLAVAVSA LTLELASQERVCLEDALVDAQGILAYLSHRGVIAETVAPAKMPRFGCYLKDYKKYHAPSSGLVEYLAPVGEPLAAGQPLV NLLRMDLYGTADELKTVCLPQDCVPILHFASASVHQGTELYKVMTHVFELPTI
Sequences:
>Translated_373_residues MPPTRSSLQIGELAAGQALTLPIYHFKPSDDKATGPKVYIQANVHGAEVQGNAVIYQLMKQLEHCDIRGEITLVPLANPL GINQKSGEFTLGRFDPITGANWNREYLNHAIDLPTWYSEHAKLSDNELIQAYRSTLVEACQQKLRHEWGITTGHRLAVNL QIMAHGADIVLDLHTGPKSCKHLYCPEYDLAAAQFLSIPYTLVIPNTFGGAMDEAAFCPWWQLSNFAKAQGRDLAVAVSA LTLELASQERVCLEDALVDAQGILAYLSHRGVIAETVAPAKMPRFGCYLKDYKKYHAPSSGLVEYLAPVGEPLAAGQPLV NLLRMDLYGTADELKTVCLPQDCVPILHFASASVHQGTELYKVMTHVFELPTI >Mature_372_residues PPTRSSLQIGELAAGQALTLPIYHFKPSDDKATGPKVYIQANVHGAEVQGNAVIYQLMKQLEHCDIRGEITLVPLANPLG INQKSGEFTLGRFDPITGANWNREYLNHAIDLPTWYSEHAKLSDNELIQAYRSTLVEACQQKLRHEWGITTGHRLAVNLQ IMAHGADIVLDLHTGPKSCKHLYCPEYDLAAAQFLSIPYTLVIPNTFGGAMDEAAFCPWWQLSNFAKAQGRDLAVAVSAL TLELASQERVCLEDALVDAQGILAYLSHRGVIAETVAPAKMPRFGCYLKDYKKYHAPSSGLVEYLAPVGEPLAAGQPLVN LLRMDLYGTADELKTVCLPQDCVPILHFASASVHQGTELYKVMTHVFELPTI
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41045; Mature: 40913
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTRSSLQIGELAAGQALTLPIYHFKPSDDKATGPKVYIQANVHGAEVQGNAVIYQLMK CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHH QLEHCDIRGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHAIDLPTWYSEH HHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCHHCC AKLSDNELIQAYRSTLVEACQQKLRHEWGITTGHRLAVNLQIMAHGADIVLDLHTGPKSC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEEECCCCHHH KHLYCPEYDLAAAQFLSIPYTLVIPNTFGGAMDEAAFCPWWQLSNFAKAQGRDLAVAVSA CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHCCCEEEEEHHH LTLELASQERVCLEDALVDAQGILAYLSHRGVIAETVAPAKMPRFGCYLKDYKKYHAPSS HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCC GLVEYLAPVGEPLAAGQPLVNLLRMDLYGTADELKTVCLPQDCVPILHFASASVHQGTEL HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHHCCHHH YKVMTHVFELPTI HHHHHHHHHCCCC >Mature Secondary Structure PPTRSSLQIGELAAGQALTLPIYHFKPSDDKATGPKVYIQANVHGAEVQGNAVIYQLMK CCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHH QLEHCDIRGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHAIDLPTWYSEH HHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCHHCC AKLSDNELIQAYRSTLVEACQQKLRHEWGITTGHRLAVNLQIMAHGADIVLDLHTGPKSC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEEECCCCHHH KHLYCPEYDLAAAQFLSIPYTLVIPNTFGGAMDEAAFCPWWQLSNFAKAQGRDLAVAVSA CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHCCCEEEEEHHH LTLELASQERVCLEDALVDAQGILAYLSHRGVIAETVAPAKMPRFGCYLKDYKKYHAPSS HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCC GLVEYLAPVGEPLAAGQPLVNLLRMDLYGTADELKTVCLPQDCVPILHFASASVHQGTEL HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHHCCHHH YKVMTHVFELPTI HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA