Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is yacL [C]

Identifier: 160876941

GI number: 160876941

Start: 4518512

End: 4518964

Strand: Reverse

Name: yacL [C]

Synonym: Sbal195_3837

Alternate gene names: 160876941

Gene position: 4518964-4518512 (Counterclockwise)

Preceding gene: 160876943

Following gene: 160876938

Centisome position: 84.51

GC content: 46.58

Gene sequence:

>453_bases
GTGCTGCGGGAGGCGAGCAACTTCGCCAAGGATAGGTTAAAATTAGCATTAGTAGGCTTAGAGCAAAGAGACAATAAAAT
GGAATACGAATTTCGGCGCAACAGTTTAACCGGCACTTTTCTGGCCAGCTTTAGCATGGATCATGAAGTGCTGGGGCAGT
GGTTTACAGAAGAATTAGGGCCAGACTTAGCCAAAATTCAGCAAGTGTTGGGCATGATTAAAGACATTCAAACCGATAAA
CGCGGTGCATGGCGCCTCGTTGGTAATGATTTCACTTTAGAGTTAGAGCGTGAGCAGGCGCGGGTGTTTGCGAATTCGTT
AGGTTTTGAGCAAGAGTATGAGTTAGAAGAGGCTATGTCACTCTATGATGCTGAGTCTGAGGCCTATTGTGGCTTAGAGG
ACTTTGAGCAGGCGCTACTGAGTTGGCAGCAGTTTGTCGAGAAAGGTCTGTAA

Upstream 100 bases:

>100_bases
TCAAAATCATATAAACAAGCTAACTGATTTTGTCATGAAAATGAAGTCAGTACTTGTGCTTAACGGATAAGAGGCTTGCC
CTGAGCGCCCTAAATCTGCT

Downstream 100 bases:

>100_bases
TCATCCATTTAAGTCCAGTTCGATTAAAAACATAAAGGCAATCATGGGATTGCCTTTATTGTTTGCGCGATACCTCGCTA
AACTCAGGGATTACTGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK
RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL

Sequences:

>Translated_150_residues
MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK
RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL
>Mature_150_residues
MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK
RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family [H]

Homologues:

Organism=Escherichia coli, GI87081687, Length=122, Percent_Identity=38.5245901639344, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008249
- ProDom:   PD020773 [H]

Pfam domain/function: PF06062 UPF0231 [H]

EC number: NA

Molecular weight: Translated: 17404; Mature: 17404

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELG
CCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHC
PDLAKIQQVLGMIKDIQTDKRGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMS
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH
LYDAESEAYCGLEDFEQALLSWQQFVEKGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELG
CCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHC
PDLAKIQQVLGMIKDIQTDKRGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMS
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH
LYDAESEAYCGLEDFEQALLSWQQFVEKGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA