| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yacL [C]
Identifier: 160876941
GI number: 160876941
Start: 4518512
End: 4518964
Strand: Reverse
Name: yacL [C]
Synonym: Sbal195_3837
Alternate gene names: 160876941
Gene position: 4518964-4518512 (Counterclockwise)
Preceding gene: 160876943
Following gene: 160876938
Centisome position: 84.51
GC content: 46.58
Gene sequence:
>453_bases GTGCTGCGGGAGGCGAGCAACTTCGCCAAGGATAGGTTAAAATTAGCATTAGTAGGCTTAGAGCAAAGAGACAATAAAAT GGAATACGAATTTCGGCGCAACAGTTTAACCGGCACTTTTCTGGCCAGCTTTAGCATGGATCATGAAGTGCTGGGGCAGT GGTTTACAGAAGAATTAGGGCCAGACTTAGCCAAAATTCAGCAAGTGTTGGGCATGATTAAAGACATTCAAACCGATAAA CGCGGTGCATGGCGCCTCGTTGGTAATGATTTCACTTTAGAGTTAGAGCGTGAGCAGGCGCGGGTGTTTGCGAATTCGTT AGGTTTTGAGCAAGAGTATGAGTTAGAAGAGGCTATGTCACTCTATGATGCTGAGTCTGAGGCCTATTGTGGCTTAGAGG ACTTTGAGCAGGCGCTACTGAGTTGGCAGCAGTTTGTCGAGAAAGGTCTGTAA
Upstream 100 bases:
>100_bases TCAAAATCATATAAACAAGCTAACTGATTTTGTCATGAAAATGAAGTCAGTACTTGTGCTTAACGGATAAGAGGCTTGCC CTGAGCGCCCTAAATCTGCT
Downstream 100 bases:
>100_bases TCATCCATTTAAGTCCAGTTCGATTAAAAACATAAAGGCAATCATGGGATTGCCTTTATTGTTTGCGCGATACCTCGCTA AACTCAGGGATTACTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL
Sequences:
>Translated_150_residues MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL >Mature_150_residues MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELGPDLAKIQQVLGMIKDIQTDK RGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMSLYDAESEAYCGLEDFEQALLSWQQFVEKGL
Specific function: Unknown
COG id: COG3112
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0231 family [H]
Homologues:
Organism=Escherichia coli, GI87081687, Length=122, Percent_Identity=38.5245901639344, Blast_Score=85, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008249 - ProDom: PD020773 [H]
Pfam domain/function: PF06062 UPF0231 [H]
EC number: NA
Molecular weight: Translated: 17404; Mature: 17404
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELG CCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHC PDLAKIQQVLGMIKDIQTDKRGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMS CCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH LYDAESEAYCGLEDFEQALLSWQQFVEKGL HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLREASNFAKDRLKLALVGLEQRDNKMEYEFRRNSLTGTFLASFSMDHEVLGQWFTEELG CCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHC PDLAKIQQVLGMIKDIQTDKRGAWRLVGNDFTLELEREQARVFANSLGFEQEYELEEAMS CCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH LYDAESEAYCGLEDFEQALLSWQQFVEKGL HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA