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The map label for this gene is visC [H]

Identifier: 160876906

GI number: 160876906

Start: 4483037

End: 4484245

Strand: Reverse

Name: visC [H]

Synonym: Sbal195_3802

Alternate gene names: 160876906

Gene position: 4484245-4483037 (Counterclockwise)

Preceding gene: 160876907

Following gene: 160876905

Centisome position: 83.86

GC content: 53.6

Gene sequence:

>1209_bases
ATGTTAAGTTCACAAGCCTATGACATCGCCATTGTGGGTGGCGGCATGGTGGGACTCGCCACCGCGATTGGATTGGCACA
GGCCAATCTTAATGTCGTCGTTATCGATGCGGGCCACACGGATGCCGTTGTCGGCGAGCCGCGCCTGCGGGTGAGCGCCA
TCAATAAGGCGAGTCAGCGCTTGTTAGAAAACTTAGGTGCATGGACTTATTTAGACACTTCCCGCGCCACGCCTTATCAA
AAAATGGCGGTGTGGGATAAAGATGGTTTCGGCAAAATTGCCTTTGACGCCAACAGCATCAGCGAAACCAGTCTCGGCGC
GATTATCGAAAACGATGCCATTAGCTTTGCGCTGGCGAAACGCGTCGGTGAGTTTGACAATATCACCCATATCGAAAACC
AACGCTTAGAACGCATTGCCTTTGGTGAGCGCGAAGCTTGGCTAACCCTCGCTAATGGTGAAAATGTCAGTGCTGCCTTG
GTAATCGCTGCCGATGGCGCCAACTCTTGGGTGCGTGAGCAATGCAAGATCCCGCTGACATTTTGGGATTACGGCCACCA
CGCAATCGTCGCGACGATCCGCACCGAAATGCCGCACCTTGCCACCGCCCGCCAAGTGTTTTTACAGGACGGCCCGTTAG
CATTTTTACCCCTGTATGATGATAATCTCTGCTCCATCGTCTGGTCGGTGCCGCCCGAGCGTGCCAATGAATTATTGGCG
ATGGACAAAGTGCAATTCGAGCGCAACTTAACCGCGGCTTTCGACGGTCGTTTGGGGATTTGCCAGTTGGAAAGCGAGCG
CCAAGCTTTCCCATTACGGATGCGCTACGCCCGCCATTTTGCCCGCCACCGTTTAGTGTTGGCAGGCGACGCCGCCCACA
CTATCCATCCGCTGGCGGGCCAAGGGGTTAACCTCGGCTTTTTAGATGCGGCCAGCATTATCGAAGTCATCAGTGAATTA
CAGCAAGCGGGTAAAGATATCGGCGATTATGCTCAGCTGCGCGCACTGGAACGTTGGCGTAAAGCCGATGCTATGGAGAT
GATCGCGGCGATGGAAGGCTTTAAACGCTTATTCGAAGGGACAAATCCGCTGAAAAAAGCGATCCGCGATCTGGGCTTAA
ATCTGGTTGATAATGTCGCTGGGCTGAAAACAGTGTTCATACAACAGGCCATGGGCAATAAGTCGGCGCTGCCTAAGTTG
TGTCGTTAG

Upstream 100 bases:

>100_bases
CTTGGTTTCCGCCACTTAAAACCCCCGTTGCTCAAAAGGCGATGGGCTGGAAATAACCCGCTTTTCATTACTGGTATCGC
AACGCGAAAAGGATGTACCC

Downstream 100 bases:

>100_bases
CCTCGGTTGCGCTAATGTGATCAGAATTGCCGCTAATATCAGCATATTGACTGCAAGCTGCGCAAATCTGGTCTTCGCAT
GTAAAAAAATTACATGTTAA

Product: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MLSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAGHTDAVVGEPRLRVSAINKASQRLLENLGAWTYLDTSRATPYQ
KMAVWDKDGFGKIAFDANSISETSLGAIIENDAISFALAKRVGEFDNITHIENQRLERIAFGEREAWLTLANGENVSAAL
VIAADGANSWVREQCKIPLTFWDYGHHAIVATIRTEMPHLATARQVFLQDGPLAFLPLYDDNLCSIVWSVPPERANELLA
MDKVQFERNLTAAFDGRLGICQLESERQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAGQGVNLGFLDAASIIEVISEL
QQAGKDIGDYAQLRALERWRKADAMEMIAAMEGFKRLFEGTNPLKKAIRDLGLNLVDNVAGLKTVFIQQAMGNKSALPKL
CR

Sequences:

>Translated_402_residues
MLSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAGHTDAVVGEPRLRVSAINKASQRLLENLGAWTYLDTSRATPYQ
KMAVWDKDGFGKIAFDANSISETSLGAIIENDAISFALAKRVGEFDNITHIENQRLERIAFGEREAWLTLANGENVSAAL
VIAADGANSWVREQCKIPLTFWDYGHHAIVATIRTEMPHLATARQVFLQDGPLAFLPLYDDNLCSIVWSVPPERANELLA
MDKVQFERNLTAAFDGRLGICQLESERQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAGQGVNLGFLDAASIIEVISEL
QQAGKDIGDYAQLRALERWRKADAMEMIAAMEGFKRLFEGTNPLKKAIRDLGLNLVDNVAGLKTVFIQQAMGNKSALPKL
CR
>Mature_402_residues
MLSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAGHTDAVVGEPRLRVSAINKASQRLLENLGAWTYLDTSRATPYQ
KMAVWDKDGFGKIAFDANSISETSLGAIIENDAISFALAKRVGEFDNITHIENQRLERIAFGEREAWLTLANGENVSAAL
VIAADGANSWVREQCKIPLTFWDYGHHAIVATIRTEMPHLATARQVFLQDGPLAFLPLYDDNLCSIVWSVPPERANELLA
MDKVQFERNLTAAFDGRLGICQLESERQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAGQGVNLGFLDAASIIEVISEL
QQAGKDIGDYAQLRALERWRKADAMEMIAAMEGFKRLFEGTNPLKKAIRDLGLNLVDNVAGLKTVFIQQAMGNKSALPKL
CR

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=377, Percent_Identity=32.6259946949602, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI32967307, Length=343, Percent_Identity=32.3615160349854, Blast_Score=153, Evalue=3e-37,
Organism=Escherichia coli, GI1789273, Length=400, Percent_Identity=54.25, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1786883, Length=394, Percent_Identity=35.7868020304569, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1789274, Length=390, Percent_Identity=31.025641025641, Blast_Score=171, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI25146631, Length=435, Percent_Identity=29.1954022988506, Blast_Score=167, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6321694, Length=458, Percent_Identity=26.2008733624454, Blast_Score=136, Evalue=7e-33,
Organism=Drosophila melanogaster, GI19920760, Length=435, Percent_Identity=32.183908045977, Blast_Score=169, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44093; Mature: 44093

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAGHTDAVVGEPRLRVSAINKASQR
CCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH
LLENLGAWTYLDTSRATPYQKMAVWDKDGFGKIAFDANSISETSLGAIIENDAISFALAK
HHHHCCCEEEEECCCCCCCHHEEEECCCCCCEEEECCCCCCCHHHHHEEECCHHHHHHHH
RVGEFDNITHIENQRLERIAFGEREAWLTLANGENVSAALVIAADGANSWVREQCKIPLT
HHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCEE
FWDYGHHAIVATIRTEMPHLATARQVFLQDGPLAFLPLYDDNLCSIVWSVPPERANELLA
EEECCCEEEEEEEHHCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHH
MDKVQFERNLTAAFDGRLGICQLESERQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAG
HHHHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCCCHHCCCCCC
QGVNLGFLDAASIIEVISELQQAGKDIGDYAQLRALERWRKADAMEMIAAMEGFKRLFEG
CCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TNPLKKAIRDLGLNLVDNVAGLKTVFIQQAMGNKSALPKLCR
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
>Mature Secondary Structure
MLSSQAYDIAIVGGGMVGLATAIGLAQANLNVVVIDAGHTDAVVGEPRLRVSAINKASQR
CCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH
LLENLGAWTYLDTSRATPYQKMAVWDKDGFGKIAFDANSISETSLGAIIENDAISFALAK
HHHHCCCEEEEECCCCCCCHHEEEECCCCCCEEEECCCCCCCHHHHHEEECCHHHHHHHH
RVGEFDNITHIENQRLERIAFGEREAWLTLANGENVSAALVIAADGANSWVREQCKIPLT
HHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCEE
FWDYGHHAIVATIRTEMPHLATARQVFLQDGPLAFLPLYDDNLCSIVWSVPPERANELLA
EEECCCEEEEEEEHHCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHH
MDKVQFERNLTAAFDGRLGICQLESERQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAG
HHHHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCCCHHCCCCCC
QGVNLGFLDAASIIEVISELQQAGKDIGDYAQLRALERWRKADAMEMIAAMEGFKRLFEG
CCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TNPLKKAIRDLGLNLVDNVAGLKTVFIQQAMGNKSALPKLCR
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]