| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is lgt [H]
Identifier: 160876885
GI number: 160876885
Start: 4456767
End: 4457546
Strand: Reverse
Name: lgt [H]
Synonym: Sbal195_3781
Alternate gene names: 160876885
Gene position: 4457546-4456767 (Counterclockwise)
Preceding gene: 160876886
Following gene: 160876883
Centisome position: 83.36
GC content: 45.0
Gene sequence:
>780_bases TTGGAACACTTAGTGTGGGAGCTCGATCCTGTATTAATCTCGTTTATGGGACTAAAAATACATTGGTATGGAGTCTTGTT TGCTGTTGCTATCACTGCTGGTTTTCAGGTGATGAAGCGGATTTATATCAAGGAAAACCTCGATGTCGAGTCCCTTGATA ATCTACTGATTTATTGTGTGGTTGGCATCATAGTGGGCGCGCGTTTAGCCCATTGTATTTTTTACGATCCGGCTTATTAC TTTGCCCATCCGCTGAAGATTTTGGCTATTTGGGAAGGTGGACTCGCCAGCCACGGTGGGGGTTTAGGGGCGATTCTGGC GCTGTATTATTATCAACGCAAAGTGAAGCTGCCCTTCCTATTTTTGTTGGATAGACTCGCGATCGCAACCGCCATTTTTG GCTTTTTTGTGCGTATGGCGAACTTTGCCAACTCAGAGATTTTAGGCGATCCAACGACAAAACCTTGGGGTATTATATTT GCCCGTGTTGATCTGTTGCCAAGGCATCCGGCGCAGCTTTATGAGGCTTTTGCCTATTTAGCTATCTTTGTCGGGCTTTA TGCTCTGTATCAATTTACGCAAATTAAACAACGGTATGGCGCGATTTTCGGCTTGTTCCTAGTGTCGGTATTTAGTGCGC GAATTGCGATTGAATCGATTAAAGTCAGCCAAGCGGCTTACTCTGAATCAGTGCTAAGTGCGGGACAACTTCTCAGCTTA CCGTTTTTAGCCGTTGGCATAGTCTTGTTGTTTCTGGCGTATCGAAAGAAAGCCGTTTAA
Upstream 100 bases:
>100_bases GTAAGATATCCCCGTGACAAGGCTTGTCTATTGGCGTTTAACCACGTAAAACAGGCTTTTTGGCGTACCTCTATGTACCA AGTGTTAGGAGTAATTGAAT
Downstream 100 bases:
>100_bases GTCAGAATATCAAACGGTTTAAAAAGGCTTTCTATCTAGATAGAAAGCCTTTTTTATGAAGGAATTAATCATCAAGGATG ACGTTAGGCTGTCTTCACTA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MEHLVWELDPVLISFMGLKIHWYGVLFAVAITAGFQVMKRIYIKENLDVESLDNLLIYCVVGIIVGARLAHCIFYDPAYY FAHPLKILAIWEGGLASHGGGLGAILALYYYQRKVKLPFLFLLDRLAIATAIFGFFVRMANFANSEILGDPTTKPWGIIF ARVDLLPRHPAQLYEAFAYLAIFVGLYALYQFTQIKQRYGAIFGLFLVSVFSARIAIESIKVSQAAYSESVLSAGQLLSL PFLAVGIVLLFLAYRKKAV
Sequences:
>Translated_259_residues MEHLVWELDPVLISFMGLKIHWYGVLFAVAITAGFQVMKRIYIKENLDVESLDNLLIYCVVGIIVGARLAHCIFYDPAYY FAHPLKILAIWEGGLASHGGGLGAILALYYYQRKVKLPFLFLLDRLAIATAIFGFFVRMANFANSEILGDPTTKPWGIIF ARVDLLPRHPAQLYEAFAYLAIFVGLYALYQFTQIKQRYGAIFGLFLVSVFSARIAIESIKVSQAAYSESVLSAGQLLSL PFLAVGIVLLFLAYRKKAV >Mature_259_residues MEHLVWELDPVLISFMGLKIHWYGVLFAVAITAGFQVMKRIYIKENLDVESLDNLLIYCVVGIIVGARLAHCIFYDPAYY FAHPLKILAIWEGGLASHGGGLGAILALYYYQRKVKLPFLFLLDRLAIATAIFGFFVRMANFANSEILGDPTTKPWGIIF ARVDLLPRHPAQLYEAFAYLAIFVGLYALYQFTQIKQRYGAIFGLFLVSVFSARIAIESIKVSQAAYSESVLSAGQLLSL PFLAVGIVLLFLAYRKKAV
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=280, Percent_Identity=28.5714285714286, Blast_Score=120, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 29003; Mature: 29003
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHLVWELDPVLISFMGLKIHWYGVLFAVAITAGFQVMKRIYIKENLDVESLDNLLIYCV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VGIIVGARLAHCIFYDPAYYFAHPLKILAIWEGGLASHGGGLGAILALYYYQRKVKLPFL HHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHH FLLDRLAIATAIFGFFVRMANFANSEILGDPTTKPWGIIFARVDLLPRHPAQLYEAFAYL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH AIFVGLYALYQFTQIKQRYGAIFGLFLVSVFSARIAIESIKVSQAAYSESVLSAGQLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLAVGIVLLFLAYRKKAV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEHLVWELDPVLISFMGLKIHWYGVLFAVAITAGFQVMKRIYIKENLDVESLDNLLIYCV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VGIIVGARLAHCIFYDPAYYFAHPLKILAIWEGGLASHGGGLGAILALYYYQRKVKLPFL HHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHH FLLDRLAIATAIFGFFVRMANFANSEILGDPTTKPWGIIFARVDLLPRHPAQLYEAFAYL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH AIFVGLYALYQFTQIKQRYGAIFGLFLVSVFSARIAIESIKVSQAAYSESVLSAGQLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLAVGIVLLFLAYRKKAV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA