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The map label for this gene is yjcL [H]

Identifier: 160876836

GI number: 160876836

Start: 4399250

End: 4400497

Strand: Reverse

Name: yjcL [H]

Synonym: Sbal195_3732

Alternate gene names: 160876836

Gene position: 4400497-4399250 (Counterclockwise)

Preceding gene: 160876837

Following gene: 160876835

Centisome position: 82.29

GC content: 46.96

Gene sequence:

>1248_bases
ATGACAAGCACGGCCTTAGTGACGAACGATGCCACGGCGTTAGGGATACTCGCGACAATTCTAGGTTTTGTATTTTATAC
CAGCAGCAGTAGTCATCCTTTTTGGCAGAAGTTTTATCGTTTTATTCCCGCCCTTTTGTTGTGCTATTTCTTGCCATCAT
TATTGAATACCTTTGGGGTGATCGACGGTAATACCTCACAACTGTATTTTGTGGCGTCACGTTATTTACTGCCAGCTTGT
TTAGTCTTGTTGATTTTAAGTGTTGATTTAAAAGCGATTTTAAGTTTAGGGCCAAAAGCCTTAATCATGTTTTTAACCGG
CACTGTCGGTATCGTCATCGGTGGCCCGATTGCTTTGCTGTTAGTGTCTGTTATCGAGCCTTCTTTGATCGGGGTAGATG
GTCCCGATGCAGTATGGCGCGGCATGACTACTTTAGCTGGAAGCTGGATTGGTGGCGGCGCAAACCAAGCGGCGATGAAA
GAAATCTATGTAGTCGGTGGCAATATTTTCTCTGTGATGGTGACAGTCGATGTGATTGTCGCCAATATCTGGATGGCCGT
GTTGCTATTTATGGCCTCAAAGGCGAAAGAAATCGATGCCAGAACGGGTGCCGATACCTCAGCAATTGAAGCGTTAAAAG
AAAAAGTTGAAAAGTATCACGCTGAAAATGCACGCATTCCTAATCTGCGCGATCTTATGCTGATTGTCGCCGTTGGCTTT
GGGATCACAGGTATCGCCCACATGGCCGCCGATTTTCTTGGGCCATTTTTTGAAGCGAACTACCCTTGGACCGAAGATTA
CAGCTTAACCTCTAAGTTTTTCTGGTTAGTGGTGATAGTCACAACCATTGGTTTGGCGATGTCCTTCAGCCCAGTACGCC
ATTTAGAGGCGGCGGGGGCATCGAAAGTGGCGTCGGCCTTCCTTTACATCTTGGTGGCGACGATTGGTCTGCATATGGAT
GTGAGTAAAGTGCTCGACACACCTTTGTACTTTTTAATCGGTATTGTGTGGATGATAGTGCATGCTGGCTTTATGTTATT
GGTGGCTAAGTTGATAAAAGCGCCGCTGTTTTACATGGCCGTGGGTAGTCAAGCAAATGTCGGCGGTGCGGCATCTGCCC
CTGTTGTTGCTGCGGCATTTCACCCCGCTTTAGCGCCTGTTGGTGTGTTGTTAGCCGTATTTGGTTATGCGTTAGGGACT
TACATGGCGTGGCTCTGTGGTCAACTTTTACAGCTAGTTGCAGCATAG

Upstream 100 bases:

>100_bases
AAATAATAACACTGGGCAGATGGAAGTTTGACCCAGGGACTTAAAGGTTAAGTCTCTAATAAAAATAAAATAATAACTGT
ATTAACAGGGAGAAATTAGC

Downstream 100 bases:

>100_bases
CGGCCTTAGCCCTATATTCAGTTCATCGCTGGGAAAGGTTCCAGCATTTTAGAGAGAAGTTGCGATGAGTAATAAAATCA
TAAACCTAGGTTCAATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTSTALVTNDATALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGVIDGNTSQLYFVASRYLLPAC
LVLLILSVDLKAILSLGPKALIMFLTGTVGIVIGGPIALLLVSVIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMK
EIYVVGGNIFSVMVTVDVIVANIWMAVLLFMASKAKEIDARTGADTSAIEALKEKVEKYHAENARIPNLRDLMLIVAVGF
GITGIAHMAADFLGPFFEANYPWTEDYSLTSKFFWLVVIVTTIGLAMSFSPVRHLEAAGASKVASAFLYILVATIGLHMD
VSKVLDTPLYFLIGIVWMIVHAGFMLLVAKLIKAPLFYMAVGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYALGT
YMAWLCGQLLQLVAA

Sequences:

>Translated_415_residues
MTSTALVTNDATALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGVIDGNTSQLYFVASRYLLPAC
LVLLILSVDLKAILSLGPKALIMFLTGTVGIVIGGPIALLLVSVIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMK
EIYVVGGNIFSVMVTVDVIVANIWMAVLLFMASKAKEIDARTGADTSAIEALKEKVEKYHAENARIPNLRDLMLIVAVGF
GITGIAHMAADFLGPFFEANYPWTEDYSLTSKFFWLVVIVTTIGLAMSFSPVRHLEAAGASKVASAFLYILVATIGLHMD
VSKVLDTPLYFLIGIVWMIVHAGFMLLVAKLIKAPLFYMAVGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYALGT
YMAWLCGQLLQLVAA
>Mature_414_residues
TSTALVTNDATALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGVIDGNTSQLYFVASRYLLPACL
VLLILSVDLKAILSLGPKALIMFLTGTVGIVIGGPIALLLVSVIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMKE
IYVVGGNIFSVMVTVDVIVANIWMAVLLFMASKAKEIDARTGADTSAIEALKEKVEKYHAENARIPNLRDLMLIVAVGFG
ITGIAHMAADFLGPFFEANYPWTEDYSLTSKFFWLVVIVTTIGLAMSFSPVRHLEAAGASKVASAFLYILVATIGLHMDV
SKVLDTPLYFLIGIVWMIVHAGFMLLVAKLIKAPLFYMAVGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYALGTY
MAWLCGQLLQLVAA

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 44215; Mature: 44084

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTALVTNDATALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGV
CCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDGNTSQLYFVASRYLLPACLVLLILSVDLKAILSLGPKALIMFLTGTVGIVIGGPIALL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
LVSVIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMKEIYVVGGNIFSVMVTVDVIV
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCHHHHHHHHHHHHH
ANIWMAVLLFMASKAKEIDARTGADTSAIEALKEKVEKYHAENARIPNLRDLMLIVAVGF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GITGIAHMAADFLGPFFEANYPWTEDYSLTSKFFWLVVIVTTIGLAMSFSPVRHLEAAGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH
SKVASAFLYILVATIGLHMDVSKVLDTPLYFLIGIVWMIVHAGFMLLVAKLIKAPLFYMA
HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE
VGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYALGTYMAWLCGQLLQLVAA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSTALVTNDATALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGV
CCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDGNTSQLYFVASRYLLPACLVLLILSVDLKAILSLGPKALIMFLTGTVGIVIGGPIALL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
LVSVIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMKEIYVVGGNIFSVMVTVDVIV
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCHHHHHHHHHHHHH
ANIWMAVLLFMASKAKEIDARTGADTSAIEALKEKVEKYHAENARIPNLRDLMLIVAVGF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GITGIAHMAADFLGPFFEANYPWTEDYSLTSKFFWLVVIVTTIGLAMSFSPVRHLEAAGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH
SKVASAFLYILVATIGLHMDVSKVLDTPLYFLIGIVWMIVHAGFMLLVAKLIKAPLFYMA
HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE
VGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYALGTYMAWLCGQLLQLVAA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]