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The map label for this gene is sirB1 [H]

Identifier: 160876837

GI number: 160876837

Start: 4400652

End: 4401440

Strand: Reverse

Name: sirB1 [H]

Synonym: Sbal195_3733

Alternate gene names: 160876837

Gene position: 4401440-4400652 (Counterclockwise)

Preceding gene: 160876838

Following gene: 160876836

Centisome position: 82.31

GC content: 48.92

Gene sequence:

>789_bases
ATGGGTAACTACACTCTGCAAGATGGCATTTCATTGCCCGAGTCGGCATTGGATGTAGGTGCGCACCTTGGATTTTCTAA
ACTAGAAGCCGCTAAATGGGCTTGGTTTGAAATGGCGGGAGCCGTATTAAGTCATTACTTGGTTGACCAACAACAGCGTT
TTAATGCGCTGTTGCATTGGTTTTACGAGGATTTAGGCTTTTGTGTCCGCGATAATTACTTCAGTACTGAGGCGGCGGAT
TTAGGCACTTGCTTAATTAGCCGCCAAGGGAATAGCACTACGCTGGCAACTGTCTTGATGTTACTGGCGAAGCAGTTAGA
TCTTGAGCTTGAACCGATATTACTACCCGGCAATACGGTGCTGCGTTGCAAGATTGCCGGTGAAGTGAGTTATCTGGACC
CTTTGACGGGCAAGGAGCTCAGCCGTCACCAGTTGCATGTGTTAGTGCGCGGCGAGTTAGGCAATGCGGCCGAGCTTAAG
GCGAGTTACTTAAAACCTGCAACGGTGAAAAAACTGCTGACGCGTATGCTGCATGAGCTAAAAGCCGGTTGCATAGTGTC
GCATCAATTTGAGGCGGCGATGGAATGTTGCAGTCTGCTATTGCAATGGCATAGCGATGATGTGCACCTCAATCGTGAGC
GAGCCTTTATCGCGCAGCAGCTGGGTTGTATTAATGTGGCCGCTGCTGATTTGCAGCACTTTGTCGATAACAGCCCCCAC
GATCCCGTGATCGAAATCGTGAAGATGCAGCTCAAAGAATTAAACGAGCATGCCGAGATTTACCATTAA

Upstream 100 bases:

>100_bases
GAAACAAGTTGTTCAAAGTGTTTGCTTACTTAGGTGCGATAGGCTGGTTGGTTTATGCTGCTAAATTGGCTCATTTTAAA
CAAGCGGTATTATTGGGTTA

Downstream 100 bases:

>100_bases
AGCAGAGCCTTTCGGGGCTCTTCTTATTTATCAACGGTTCAATCCAATCAGCAAAAATAATAACACTGGGCAGATGGAAG
TTTGACCCAGGGACTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGNYTLQDGISLPESALDVGAHLGFSKLEAAKWAWFEMAGAVLSHYLVDQQQRFNALLHWFYEDLGFCVRDNYFSTEAAD
LGTCLISRQGNSTTLATVLMLLAKQLDLELEPILLPGNTVLRCKIAGEVSYLDPLTGKELSRHQLHVLVRGELGNAAELK
ASYLKPATVKKLLTRMLHELKAGCIVSHQFEAAMECCSLLLQWHSDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPH
DPVIEIVKMQLKELNEHAEIYH

Sequences:

>Translated_262_residues
MGNYTLQDGISLPESALDVGAHLGFSKLEAAKWAWFEMAGAVLSHYLVDQQQRFNALLHWFYEDLGFCVRDNYFSTEAAD
LGTCLISRQGNSTTLATVLMLLAKQLDLELEPILLPGNTVLRCKIAGEVSYLDPLTGKELSRHQLHVLVRGELGNAAELK
ASYLKPATVKKLLTRMLHELKAGCIVSHQFEAAMECCSLLLQWHSDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPH
DPVIEIVKMQLKELNEHAEIYH
>Mature_261_residues
GNYTLQDGISLPESALDVGAHLGFSKLEAAKWAWFEMAGAVLSHYLVDQQQRFNALLHWFYEDLGFCVRDNYFSTEAADL
GTCLISRQGNSTTLATVLMLLAKQLDLELEPILLPGNTVLRCKIAGEVSYLDPLTGKELSRHQLHVLVRGELGNAAELKA
SYLKPATVKKLLTRMLHELKAGCIVSHQFEAAMECCSLLLQWHSDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPHD
PVIEIVKMQLKELNEHAEIYH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=210, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29306; Mature: 29175

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYTLQDGISLPESALDVGAHLGFSKLEAAKWAWFEMAGAVLSHYLVDQQQRFNALLHW
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYEDLGFCVRDNYFSTEAADLGTCLISRQGNSTTLATVLMLLAKQLDLELEPILLPGNTV
HHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEE
LRCKIAGEVSYLDPLTGKELSRHQLHVLVRGELGNAAELKASYLKPATVKKLLTRMLHEL
EEEEEECCCCCCCCCCCCHHCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
KAGCIVSHQFEAAMECCSLLLQWHSDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPH
HHCCEEHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
DPVIEIVKMQLKELNEHAEIYH
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNYTLQDGISLPESALDVGAHLGFSKLEAAKWAWFEMAGAVLSHYLVDQQQRFNALLHW
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYEDLGFCVRDNYFSTEAADLGTCLISRQGNSTTLATVLMLLAKQLDLELEPILLPGNTV
HHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEE
LRCKIAGEVSYLDPLTGKELSRHQLHVLVRGELGNAAELKASYLKPATVKKLLTRMLHEL
EEEEEECCCCCCCCCCCCHHCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
KAGCIVSHQFEAAMECCSLLLQWHSDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPH
HHCCEEHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
DPVIEIVKMQLKELNEHAEIYH
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]