| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is zntR [C]
Identifier: 160876082
GI number: 160876082
Start: 3530346
End: 3530753
Strand: Direct
Name: zntR [C]
Synonym: Sbal195_2972
Alternate gene names: 160876082
Gene position: 3530346-3530753 (Clockwise)
Preceding gene: 160876076
Following gene: 160876083
Centisome position: 66.02
GC content: 47.3
Gene sequence:
>408_bases ATGAGCGCAACGAACACACCACAAACGACTTACTCGATCAGTGATCTCTCAAAAGAGTTTGATATCACTACTCGTAGTAT TCGTTTTTACGAAGACCAAGGTTTACTTAAGCCTAAACGCCGCGGCCAAACCCGTATTTATAGCCTCAAAGACAGAGTGC GCCTCAAGCTCATTCTTCGCGGTAAACGCTTGGGCTTTTCGTTGGCAGAAACCCGTCGCCTGTTCGAATTATACGATGCC GACAAGAGCAGCACCGCACAGCTCAATACCATGCTGGCGCTAGTGGAAGAAAAGAAATCCGCTCTACAACAGCAAATGGA CGACATCAAAGTCGTGTTGATGGAACTCAATTCCGCCGAGCAGCAATGCCGCTTAGCCTTAGAAGATAACAAAACGGCAA AAGCCTAA
Upstream 100 bases:
>100_bases TGGGATTGACACTTTTTTGCCAACAGAATAAAAGCCAAAATCTTTACCTTTACGTAAACTTCATATATCTTGCTTAAAAC TGATTATTTAGGGTGCATGA
Downstream 100 bases:
>100_bases ATCTCCGTTGACACAAAATCAAATCAATTTGATGGCGATAACACTACGGATTTAAGTACAAGATTGAAAAGACTCAAGCA CCTAAAAATCATAAAAACGA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Regulatory Protein MerR; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSATNTPQTTYSISDLSKEFDITTRSIRFYEDQGLLKPKRRGQTRIYSLKDRVRLKLILRGKRLGFSLAETRRLFELYDA DKSSTAQLNTMLALVEEKKSALQQQMDDIKVVLMELNSAEQQCRLALEDNKTAKA
Sequences:
>Translated_135_residues MSATNTPQTTYSISDLSKEFDITTRSIRFYEDQGLLKPKRRGQTRIYSLKDRVRLKLILRGKRLGFSLAETRRLFELYDA DKSSTAQLNTMLALVEEKKSALQQQMDDIKVVLMELNSAEQQCRLALEDNKTAKA >Mature_134_residues SATNTPQTTYSISDLSKEFDITTRSIRFYEDQGLLKPKRRGQTRIYSLKDRVRLKLILRGKRLGFSLAETRRLFELYDAD KSSTAQLNTMLALVEEKKSALQQQMDDIKVVLMELNSAEQQCRLALEDNKTAKA
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15536; Mature: 15405
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATNTPQTTYSISDLSKEFDITTRSIRFYEDQGLLKPKRRGQTRIYSLKDRVRLKLILR CCCCCCCCCEEEHHHHHHHCCCEEHEEEEECCCCCCCCCCCCCCEEEEHHHHHEEEEEEE GKRLGFSLAETRRLFELYDADKSSTAQLNTMLALVEEKKSALQQQMDDIKVVLMELNSAE CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQCRLALEDNKTAKA HHHEEHHCCCCCCCC >Mature Secondary Structure SATNTPQTTYSISDLSKEFDITTRSIRFYEDQGLLKPKRRGQTRIYSLKDRVRLKLILR CCCCCCCCEEEHHHHHHHCCCEEHEEEEECCCCCCCCCCCCCCEEEEHHHHHEEEEEEE GKRLGFSLAETRRLFELYDADKSSTAQLNTMLALVEEKKSALQQQMDDIKVVLMELNSAE CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQCRLALEDNKTAKA HHHEEHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA