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The map label for this gene is yeeY [H]

Identifier: 160876076

GI number: 160876076

Start: 3521439

End: 3522341

Strand: Direct

Name: yeeY [H]

Synonym: Sbal195_2966

Alternate gene names: 160876076

Gene position: 3521439-3522341 (Clockwise)

Preceding gene: 160876073

Following gene: 160876082

Centisome position: 65.85

GC content: 45.4

Gene sequence:

>903_bases
GTGACCTTAGACCAACTGCTGATGTTTAAAACCGTGGCTGAGGCGGGCTCACTCAAAGCCGCCAGTGACAAGCTACATAA
AACCCAACCCGCCATTAGTCAAAGTATCAAACAGTTAGAATCTCAACTCGATCTCATCTTATTTAACCGTGAAGGTTATC
GACTCGCCATCACAGAGCAAGGCCGAAAACTGCTGCAACATACCCAGCGGGTGCTGAATGAAGCGCAGGAAATGAAACAA
GTGGCGAAACATTTAGCCAAAGGCAACGAAGCGAGTATCACCTTAGCTTTTGAAGCTTCTTTCAATCTCGCTCGAATTCT
ACCGATTTTAGAACTGACTCAAAATGAGTTCCCCTATACTCAAATCATTCTCAAACAAGAATTTTTAACCGGTGCACTCG
AAGCGTTGAATCAAGATAAAGCCGAAATCATCATCTCAGCTGGCGGAATTGAGCCTATACGTTCGAGCCATTTAGAATTA
GCCTATCTATTTTCCGGTAGCCTGCTCGATGTCGCTGCGCCGCGCATGCTTGAGCGCCATCCGACACTGAGCTACGCACG
AGAGCTCGTTAACGAATACCAAATCGTGATCCAAGATACGGGCTCAGGCACTGCGAATATTGAGTTTGGGGTACAGGCGG
GGCAACGACGTTGGTATGTTAATGATTTTTATACCAAGAAAATGCTTATTCAAAGTGGCATGGGCTGGGGCAAACTGCCG
CACTATATGATTGAAGATTCACTCAAACAAGGTGTATTGATTGCATTGGATCTACGCGAAAGACAAAACAACATTCAACT
CGATTACTATGTGATGCGAAAACCCCACTCGCCTTTAGGCCCAGTCGCCCAAGCACTCTGGCAAAAGCTGATCGCTTTTT
CTGTAGATGAATTTAAAACATAA

Upstream 100 bases:

>100_bases
GCGAGAATGGAGTAGATTATGAGCCGATAAAAGATAAATAAATATGGAATAAAATCTAATATCTCATAAACTAATACTTT
ATTACTTGCGAGTAATCCCA

Downstream 100 bases:

>100_bases
CGCCAAAGTAAAAAAGGGCCAATAGGCCCTTTTAAATCAAACAAAAATTACTGTACTTCTTGCTTGGCAATGGCGCGGTC
TAACTTAGCTCGTTCAACTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRMLERHPTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSVDEFKT

Sequences:

>Translated_300_residues
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRMLERHPTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSVDEFKT
>Mature_299_residues
TLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQV
AKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELA
YLFSGSLLDVAAPRMLERHPTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLPH
YMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSVDEFKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=258, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786508, Length=307, Percent_Identity=29.6416938110749, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789492, Length=258, Percent_Identity=28.6821705426357, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787949, Length=255, Percent_Identity=23.921568627451, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI157672245, Length=173, Percent_Identity=30.0578034682081, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87082132, Length=280, Percent_Identity=24.6428571428571, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786401, Length=277, Percent_Identity=23.826714801444, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790262, Length=268, Percent_Identity=25.3731343283582, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788481, Length=272, Percent_Identity=27.2058823529412, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33930; Mature: 33798

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRMLERH
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSVDEFKT
HHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRMLERH
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSVDEFKT
HHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]