| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876055
Identifier: 160876055
GI number: 160876055
Start: 3493183
End: 3493986
Strand: Reverse
Name: 160876055
Synonym: Sbal195_2945
Alternate gene names: NA
Gene position: 3493986-3493183 (Counterclockwise)
Preceding gene: 160876057
Following gene: 160876054
Centisome position: 65.34
GC content: 36.69
Gene sequence:
>804_bases ATGTTTGAGCGATTGGAAGTATTAAGTGGTGATTTAGAAAAAGGTATATGGGCTATTGATAAAAGCTGCATTACACATTA CGGCAATGTATTCACTTCACGGAACATTCAATACTCAGATATTCAGGCTTTAACCAGAACTGAGCAAATAAGTAATGTTG TCTATATAGAAATTAAACTTATTACTGGTGAGAAGGCTAATGCAAAGTTGGATGTTAAATACTATTCCATTCTTTATGAT AATTATACAAAAGCTAAACCTTCTAGTGTCGGTGTAGACTCAACCTGTTCAAATGACCTTAAGTTGACTGATAATAGTCA CGATAAAGAAATAGCTCTAGATTTATGGAGTGGAAAGCCAAGTTCGAAAATGAATGAAGCAATTGCAAAGGTTAGTTGTA GCCAATCCAACGAACAGCGCCCAGTCAAGGAAAGGTCTACCGAGAATTTAGTTTGGTGGCTAGTTGGTATTATATTTATG CTCTTTCTATTTAGTGGGGGATATATGGGTGATAATTCATCCTCTACAAGTGAAGAATCCTCTGCAAGTCAATCTAATCC TAATGTTGATGCGCAAGTTTATTGTAAAATCGCCCTTGAAGATGCTGCAACGTATGGAGCGAAAGTACCGTGGGGTTCAA ATACGGTAGTCGTTCCTTATGAGGATGGTCGTCGTTATCGAGTCGCTATGGATGCTGAAATTAAAAATGCATATGGCACA TGGGGTAAAAGTAGAATATCTTGCATTGTTAATGGTGAACAAGTCACTCAATTAGTCATTGATGGAAAAACAATGTATAA CTAA
Upstream 100 bases:
>100_bases TAAGCAATTCATATGATAATCAGTCATAAGTGCATTCTTTATCAAGGAAATTACTTTTCGACAAAGAGTGTTTTTGATTA TCTGATATGGATGTTTAGCC
Downstream 100 bases:
>100_bases TTTAATAGAAATAATAAATAATCAATCAATTAATGCTAAATATGAGATTCACATAAAGTATGTACTTACTTATATTAATG GTGAATTTTTAATATAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFERLEVLSGDLEKGIWAIDKSCITHYGNVFTSRNIQYSDIQALTRTEQISNVVYIEIKLITGEKANAKLDVKYYSILYD NYTKAKPSSVGVDSTCSNDLKLTDNSHDKEIALDLWSGKPSSKMNEAIAKVSCSQSNEQRPVKERSTENLVWWLVGIIFM LFLFSGGYMGDNSSSTSEESSASQSNPNVDAQVYCKIALEDAATYGAKVPWGSNTVVVPYEDGRRYRVAMDAEIKNAYGT WGKSRISCIVNGEQVTQLVIDGKTMYN
Sequences:
>Translated_267_residues MFERLEVLSGDLEKGIWAIDKSCITHYGNVFTSRNIQYSDIQALTRTEQISNVVYIEIKLITGEKANAKLDVKYYSILYD NYTKAKPSSVGVDSTCSNDLKLTDNSHDKEIALDLWSGKPSSKMNEAIAKVSCSQSNEQRPVKERSTENLVWWLVGIIFM LFLFSGGYMGDNSSSTSEESSASQSNPNVDAQVYCKIALEDAATYGAKVPWGSNTVVVPYEDGRRYRVAMDAEIKNAYGT WGKSRISCIVNGEQVTQLVIDGKTMYN >Mature_267_residues MFERLEVLSGDLEKGIWAIDKSCITHYGNVFTSRNIQYSDIQALTRTEQISNVVYIEIKLITGEKANAKLDVKYYSILYD NYTKAKPSSVGVDSTCSNDLKLTDNSHDKEIALDLWSGKPSSKMNEAIAKVSCSQSNEQRPVKERSTENLVWWLVGIIFM LFLFSGGYMGDNSSSTSEESSASQSNPNVDAQVYCKIALEDAATYGAKVPWGSNTVVVPYEDGRRYRVAMDAEIKNAYGT WGKSRISCIVNGEQVTQLVIDGKTMYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29749; Mature: 29749
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERLEVLSGDLEKGIWAIDKSCITHYGNVFTSRNIQYSDIQALTRTEQISNVVYIEIKL CCCHHHHHCCCHHHCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCEEEEEEEE ITGEKANAKLDVKYYSILYDNYTKAKPSSVGVDSTCSNDLKLTDNSHDKEIALDLWSGKP EECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SSKMNEAIAKVSCSQSNEQRPVKERSTENLVWWLVGIIFMLFLFSGGYMGDNSSSTSEES CHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH SASQSNPNVDAQVYCKIALEDAATYGAKVPWGSNTVVVPYEDGRRYRVAMDAEIKNAYGT CCCCCCCCCCEEEEEEEEEECHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHCC WGKSRISCIVNGEQVTQLVIDGKTMYN CCCCEEEEEECCHHEEEEEECCCCCCC >Mature Secondary Structure MFERLEVLSGDLEKGIWAIDKSCITHYGNVFTSRNIQYSDIQALTRTEQISNVVYIEIKL CCCHHHHHCCCHHHCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCEEEEEEEE ITGEKANAKLDVKYYSILYDNYTKAKPSSVGVDSTCSNDLKLTDNSHDKEIALDLWSGKP EECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SSKMNEAIAKVSCSQSNEQRPVKERSTENLVWWLVGIIFMLFLFSGGYMGDNSSSTSEES CHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH SASQSNPNVDAQVYCKIALEDAATYGAKVPWGSNTVVVPYEDGRRYRVAMDAEIKNAYGT CCCCCCCCCCEEEEEEEEEECHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHCC WGKSRISCIVNGEQVTQLVIDGKTMYN CCCCEEEEEECCHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA