| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876054
Identifier: 160876054
GI number: 160876054
Start: 3492399
End: 3493043
Strand: Reverse
Name: 160876054
Synonym: Sbal195_2944
Alternate gene names: NA
Gene position: 3493043-3492399 (Counterclockwise)
Preceding gene: 160876055
Following gene: 160876053
Centisome position: 65.32
GC content: 38.91
Gene sequence:
>645_bases ATGCTTCAATATAGGGATAGATTTATCAAGTTTATAAGTGTTATTTGCATTGTATTACTAACTGGCTGCCAGCCTAATGA TGCTGATTTCGATGATAAAGTAAATGAGTTTAAATTGACCGAGGTCGGAGCTGATCTTGTAAATAAAAGATTTGTTCCAC CTTATAGTAGTCTTGACCCGTTACTAGAATATACCGCATGGTGTAATTCTGTCTTATGGGCGCAACTGTCGATTGAGGAG AATTCCGTTGAACTAGCTTTTTTAAGAGAAGATATCTTTGCTCTCGCTTCGCCTGAAGTTGTTGGCTTTTTCGGGGTTTT TAATGAGCTTGTTGTGCGTAGCGGTGGTGTAGATGCGATCTATCCCTATATACATGGTGATGCCGCATATCTCATGAAAC CTTCTCGTCTAGCGATGCCAATTATTAAGAAGATGCTAAATAGCTACCAAAGAAGTGCTAGTTTTAAAAAGGCAATTGAA CTTAGTAAGAAGAGACCAAAAAGGTCAAAGTCTTTCACTGATGCTGATACCTTGTGTTTTAAAGCGGACATGTTGACCGG TATTTTAGGTGGGGAAAGTCGCTCAAGGAACGTTATTAGTGAAGTTTCGGAATTAGTTCGTAAGAATACTTTGGCAAGCC AATAG
Upstream 100 bases:
>100_bases ATATGAGATTCACATAAAGTATGTACTTACTTATATTAATGGTGAATTTTTAATATAAACAATAGCATTAGTTAGGTTAT AAGTATGGAAGGATATGGTA
Downstream 100 bases:
>100_bases CTCCTGAGTGGCGGTAATGTCAATGTTTTTGTTGCCGTCACACTATCCGATCTTATAATCTATTTCTGCAGTAATCGATT ATAAGTTGTGTATTACTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLQYRDRFIKFISVICIVLLTGCQPNDADFDDKVNEFKLTEVGADLVNKRFVPPYSSLDPLLEYTAWCNSVLWAQLSIEE NSVELAFLREDIFALASPEVVGFFGVFNELVVRSGGVDAIYPYIHGDAAYLMKPSRLAMPIIKKMLNSYQRSASFKKAIE LSKKRPKRSKSFTDADTLCFKADMLTGILGGESRSRNVISEVSELVRKNTLASQ
Sequences:
>Translated_214_residues MLQYRDRFIKFISVICIVLLTGCQPNDADFDDKVNEFKLTEVGADLVNKRFVPPYSSLDPLLEYTAWCNSVLWAQLSIEE NSVELAFLREDIFALASPEVVGFFGVFNELVVRSGGVDAIYPYIHGDAAYLMKPSRLAMPIIKKMLNSYQRSASFKKAIE LSKKRPKRSKSFTDADTLCFKADMLTGILGGESRSRNVISEVSELVRKNTLASQ >Mature_214_residues MLQYRDRFIKFISVICIVLLTGCQPNDADFDDKVNEFKLTEVGADLVNKRFVPPYSSLDPLLEYTAWCNSVLWAQLSIEE NSVELAFLREDIFALASPEVVGFFGVFNELVVRSGGVDAIYPYIHGDAAYLMKPSRLAMPIIKKMLNSYQRSASFKKAIE LSKKRPKRSKSFTDADTLCFKADMLTGILGGESRSRNVISEVSELVRKNTLASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24081; Mature: 24081
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYRDRFIKFISVICIVLLTGCQPNDADFDDKVNEFKLTEVGADLVNKRFVPPYSSLDP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH LLEYTAWCNSVLWAQLSIEENSVELAFLREDIFALASPEVVGFFGVFNELVVRSGGVDAI HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE YPYIHGDAAYLMKPSRLAMPIIKKMLNSYQRSASFKKAIELSKKRPKRSKSFTDADTLCF EHEEECCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH KADMLTGILGGESRSRNVISEVSELVRKNTLASQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLQYRDRFIKFISVICIVLLTGCQPNDADFDDKVNEFKLTEVGADLVNKRFVPPYSSLDP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH LLEYTAWCNSVLWAQLSIEENSVELAFLREDIFALASPEVVGFFGVFNELVVRSGGVDAI HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE YPYIHGDAAYLMKPSRLAMPIIKKMLNSYQRSASFKKAIELSKKRPKRSKSFTDADTLCF EHEEECCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH KADMLTGILGGESRSRNVISEVSELVRKNTLASQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA