| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is sstT [H]
Identifier: 160876045
GI number: 160876045
Start: 3480177
End: 3481403
Strand: Reverse
Name: sstT [H]
Synonym: Sbal195_2935
Alternate gene names: 160876045
Gene position: 3481403-3480177 (Counterclockwise)
Preceding gene: 160876046
Following gene: 160876044
Centisome position: 65.11
GC content: 46.13
Gene sequence:
>1227_bases ATGAAACAAGAATCATCATTGTTAGCTAAGTTGGCTAATGGCAGTCTAGTAATACAAATCTTTTTGGGGATAATCGCTGG TGTGGTCTTAGCCAGTTTTTCACCGAGTAGCGCGAAAGATATCGCCTTCTTAGGCAGTTTATTCGTTGGGGCATTGAAAG CGATTGCTCCCATCTTAGTATTTATCTTAGTGGCGTCATCGATTGCCAACCAAAAGAAGAATACCCAAACCAATATGCGT CCCATTGTGGTGCTGTACTTATTCGGCACTTTTGCGGCCGCATTAACCGCAGTGCTCCTGAGTTCAATTTTCCCGACTAA TTTAGTCTTAGTTGCCGGCGTGGAAGGCACCAGCCCACCACAGGGCATAGGTGAAGTCATTCATACCTTGTTATTCAAAC TGGTTGATAACCCAGTCAATGCATTAATGACGGGCAACTATATTGGTATTCTCGCTTGGGGTGTGGGCTTAGGTTTAGCC TTACATCACGCCACCGATTCGACTAAACAAGTGTTTGCCGATATGAGCCACGGTATTTCACAAATGGTGCGCTTTATTAT CCGTTTAGCGCCTATCGGTATTTTTGGTCTCGTTGCGGCGACATTTGCCGAAACCGGTTTTGCGGCGATTGCAGGCTATG CCCAGTTATTGGCCGTGCTATTAGGTGCGATGGCGATTATTGCTTTAGTCGTTAATCCATTGATTGTGTACGTGAAGATT AAACGTAATCCGTATCCGCTGGTATTTCAATGCTTGCGTGAAAGTGGTGTGACGGCGTTTTTTACTCGCTCGAGCGCGGC AAACATTCCGGTGAATATGGCGCTGTGTGAAAAGTTAAAGCTGCATGAAGACACTTATTCCGTTTCTATTCCCTTAGGTG CCACTATTAACATGGGCGGCGCAGCGATCACTATTACCGTATTGACCTTAGCTGCGGCGCATACCTTAGGCATTCAAGTC GATTTACTGACCGCATTGTTACTGAGTGTTGTTGCTGCCGTTTCAGCTTGCGGCGCATCGGGTGTGGCGGGTGGTTCATT ATTATTGATCCCACTGGCTTGTAGCTTGTTTGGTATTTCTAACGATGTTGCCATGCAAGTGGTTGCTGTTGGCTTTATTA TTGGTGTGGTTCAAGATGCAGCCGAAACTGCACTGAACAGCTCAACTGACGTTATCTTTACCGCTGCCGCTTGTGAAGCC GCTGAGAATAAAGCTAAACTGAGTTAA
Upstream 100 bases:
>100_bases TAGACAAGTCCAGTCACATCCTATAAAAACCTTATTGGCCTCATTTCCGAAGGTGCGCGTTGGGGATCTCAACCGAAATA TAATAACGATAGGTTAAACC
Downstream 100 bases:
>100_bases CGAGTGCTGTTATTCGTATCGAAAAGTATTATGGAAGCAGTCACTTAGGTGGCTGCTTTTTTATGGGAGTCGTTATGATC TTTTTTGATTTTAGCGTGCT
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKQESSLLAKLANGSLVIQIFLGIIAGVVLASFSPSSAKDIAFLGSLFVGALKAIAPILVFILVASSIANQKKNTQTNMR PIVVLYLFGTFAAALTAVLLSSIFPTNLVLVAGVEGTSPPQGIGEVIHTLLFKLVDNPVNALMTGNYIGILAWGVGLGLA LHHATDSTKQVFADMSHGISQMVRFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAIIALVVNPLIVYVKI KRNPYPLVFQCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITVLTLAAAHTLGIQV DLLTALLLSVVAAVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVVQDAAETALNSSTDVIFTAAACEA AENKAKLS
Sequences:
>Translated_408_residues MKQESSLLAKLANGSLVIQIFLGIIAGVVLASFSPSSAKDIAFLGSLFVGALKAIAPILVFILVASSIANQKKNTQTNMR PIVVLYLFGTFAAALTAVLLSSIFPTNLVLVAGVEGTSPPQGIGEVIHTLLFKLVDNPVNALMTGNYIGILAWGVGLGLA LHHATDSTKQVFADMSHGISQMVRFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAIIALVVNPLIVYVKI KRNPYPLVFQCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITVLTLAAAHTLGIQV DLLTALLLSVVAAVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVVQDAAETALNSSTDVIFTAAACEA AENKAKLS >Mature_408_residues MKQESSLLAKLANGSLVIQIFLGIIAGVVLASFSPSSAKDIAFLGSLFVGALKAIAPILVFILVASSIANQKKNTQTNMR PIVVLYLFGTFAAALTAVLLSSIFPTNLVLVAGVEGTSPPQGIGEVIHTLLFKLVDNPVNALMTGNYIGILAWGVGLGLA LHHATDSTKQVFADMSHGISQMVRFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAIIALVVNPLIVYVKI KRNPYPLVFQCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITVLTLAAAHTLGIQV DLLTALLLSVVAAVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVVQDAAETALNSSTDVIFTAAACEA AENKAKLS
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=271, Percent_Identity=26.1992619926199, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI223468566, Length=268, Percent_Identity=27.9850746268657, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI223468564, Length=254, Percent_Identity=27.9527559055118, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI5032093, Length=304, Percent_Identity=27.3026315789474, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI21314632, Length=310, Percent_Identity=26.4516129032258, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI169790839, Length=258, Percent_Identity=24.031007751938, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1789473, Length=403, Percent_Identity=65.2605459057072, Blast_Score=518, Evalue=1e-148, Organism=Escherichia coli, GI1789947, Length=363, Percent_Identity=24.7933884297521, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790514, Length=407, Percent_Identity=23.8329238329238, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17537407, Length=454, Percent_Identity=24.4493392070485, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71983099, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983106, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996953, Length=329, Percent_Identity=25.2279635258359, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193206505, Length=420, Percent_Identity=24.2857142857143, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 42047; Mature: 42047
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00435 PEROXIDASE_1 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQESSLLAKLANGSLVIQIFLGIIAGVVLASFSPSSAKDIAFLGSLFVGALKAIAPILV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FILVASSIANQKKNTQTNMRPIVVLYLFGTFAAALTAVLLSSIFPTNLVLVAGVEGTSPP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC QGIGEVIHTLLFKLVDNPVNALMTGNYIGILAWGVGLGLALHHATDSTKQVFADMSHGIS HHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QMVRFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAIIALVVNPLIVYVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KRNPYPLVFQCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGG CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCC AAITITVLTLAAAHTLGIQVDLLTALLLSVVAAVSACGASGVAGGSLLLIPLACSLFGIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC NDVAMQVVAVGFIIGVVQDAAETALNSSTDVIFTAAACEAAENKAKLS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCC >Mature Secondary Structure MKQESSLLAKLANGSLVIQIFLGIIAGVVLASFSPSSAKDIAFLGSLFVGALKAIAPILV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FILVASSIANQKKNTQTNMRPIVVLYLFGTFAAALTAVLLSSIFPTNLVLVAGVEGTSPP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC QGIGEVIHTLLFKLVDNPVNALMTGNYIGILAWGVGLGLALHHATDSTKQVFADMSHGIS HHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QMVRFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAIIALVVNPLIVYVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KRNPYPLVFQCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGG CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCC AAITITVLTLAAAHTLGIQVDLLTALLLSVVAAVSACGASGVAGGSLLLIPLACSLFGIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC NDVAMQVVAVGFIIGVVQDAAETALNSSTDVIFTAAACEAAENKAKLS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]