| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876044
Identifier: 160876044
GI number: 160876044
Start: 3479578
End: 3480114
Strand: Reverse
Name: 160876044
Synonym: Sbal195_2934
Alternate gene names: NA
Gene position: 3480114-3479578 (Counterclockwise)
Preceding gene: 160876045
Following gene: 160876041
Centisome position: 65.08
GC content: 46.0
Gene sequence:
>537_bases ATGGGAGTCGTTATGATCTTTTTTGATTTTAGCGTGCTAGATGCTGCAAAGCCCTGGTATGGAATAAATGACACTGTGAT GGGCGGTTTGTCCCGCAGTAAAATGACGGTTTCACCTTTAGGTTATGGTGAGTTTAGTGGCCATGTGTCGCTGGCAAATG GCGGCGGGTTTGCTTCAGTGCGTTGTGAGTTTAGCCCTATAGATGTCAGTGAGTTTACTGGGATTTACCTCGAACTCGAT GGCGACCGAACTAAAGACTATAAAGTGAATTTAAAGGATGTCGACACACCGCAAAGTACGGTATATCAAGCGCCTATGCC CACACCAACTCACCAAACCTTTGGTGTGAGTAGTGCCAGAGTGTTGAATTGGCAGCGGATAGAAATTCCATTCAGTGATT TCAAGCCCCAATGTCGGGGTAAACCCATTTCCCGTCCGAATATAGTATTGAGTCAGTTGTGCAGCTTAGGGTTAGTGATT GGCGCCCAGCAAAGTGGCGACTTTTCATTGAAAATCAGAGAAATCGGCTACTACTAG
Upstream 100 bases:
>100_bases CTTGTGAAGCCGCTGAGAATAAAGCTAAACTGAGTTAACGAGTGCTGTTATTCGTATCGAAAAGTATTATGGAAGCAGTC ACTTAGGTGGCTGCTTTTTT
Downstream 100 bases:
>100_bases CGCTTGTAGTGAGTTTCTTATGGTGAATTTATTGTCGCGAGTTTCTTACCGCTAAGTGCTTATGGCAGATGGCTTGTTGC TAATGGCGCGGGTCATCTCA
Product: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGVVMIFFDFSVLDAAKPWYGINDTVMGGLSRSKMTVSPLGYGEFSGHVSLANGGGFASVRCEFSPIDVSEFTGIYLELD GDRTKDYKVNLKDVDTPQSTVYQAPMPTPTHQTFGVSSARVLNWQRIEIPFSDFKPQCRGKPISRPNIVLSQLCSLGLVI GAQQSGDFSLKIREIGYY
Sequences:
>Translated_178_residues MGVVMIFFDFSVLDAAKPWYGINDTVMGGLSRSKMTVSPLGYGEFSGHVSLANGGGFASVRCEFSPIDVSEFTGIYLELD GDRTKDYKVNLKDVDTPQSTVYQAPMPTPTHQTFGVSSARVLNWQRIEIPFSDFKPQCRGKPISRPNIVLSQLCSLGLVI GAQQSGDFSLKIREIGYY >Mature_177_residues GVVMIFFDFSVLDAAKPWYGINDTVMGGLSRSKMTVSPLGYGEFSGHVSLANGGGFASVRCEFSPIDVSEFTGIYLELDG DRTKDYKVNLKDVDTPQSTVYQAPMPTPTHQTFGVSSARVLNWQRIEIPFSDFKPQCRGKPISRPNIVLSQLCSLGLVIG AQQSGDFSLKIREIGYY
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19576; Mature: 19444
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVVMIFFDFSVLDAAKPWYGINDTVMGGLSRSKMTVSPLGYGEFSGHVSLANGGGFASV CCEEEEEEECEEHHCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEE RCEFSPIDVSEFTGIYLELDGDRTKDYKVNLKDVDTPQSTVYQAPMPTPTHQTFGVSSAR EEEECCCCHHHHCEEEEEECCCCCCCEEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEE VLNWQRIEIPFSDFKPQCRGKPISRPNIVLSQLCSLGLVIGAQQSGDFSLKIREIGYY EEEEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCEEEEEEEECCC >Mature Secondary Structure GVVMIFFDFSVLDAAKPWYGINDTVMGGLSRSKMTVSPLGYGEFSGHVSLANGGGFASV CEEEEEEECEEHHCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEE RCEFSPIDVSEFTGIYLELDGDRTKDYKVNLKDVDTPQSTVYQAPMPTPTHQTFGVSSAR EEEECCCCHHHHCEEEEEECCCCCCCEEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEE VLNWQRIEIPFSDFKPQCRGKPISRPNIVLSQLCSLGLVIGAQQSGDFSLKIREIGYY EEEEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA