| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876030
Identifier: 160876030
GI number: 160876030
Start: 3467335
End: 3469614
Strand: Reverse
Name: 160876030
Synonym: Sbal195_2920
Alternate gene names: NA
Gene position: 3469614-3467335 (Counterclockwise)
Preceding gene: 160876031
Following gene: 160876029
Centisome position: 64.89
GC content: 48.73
Gene sequence:
>2280_bases ATGAGCGCGCGCACCACTTCTAATCCACTTCCTTTTAAGCGGCGTTTGCAGCATTTGCCAACGCCGCTTGCTGATGACGT ACTGGCAGCATTTGCTGTTGCAGCTGATCGCTTACCTGCAGCACCGATTGACTTGTGGCAGGATGAGGTTGTTGCTGGCG TGCGTGAGAAGGTTGATACCACTCGCCTGTATCAGCCTATTTTTGATAAACCTGCAGAGCGTTTTACCGCGGCAAAAGGC TTTGAAATGCTTGCGCCGCTGTCATTCCATGTGCGCAATAAAGTACAAAATACCTATCAGCAACGTGTTAATAGTGGCGG CATTGCTGCTGGCTCGGCGTATTTACGCGAAACCATTAAAAAGTTAACAGTGGTTTGGCATAAGTACCCATTTCATAAAA TATCGGGCATGAAGTTTGTTAAGCAACCAGAGCCTGTTGAGCAAGATGATGCTGTTGATAAGGATGAGATTGAAAACAGA TTATTAGCTAAAGCGTCGCCATTCAGCGCTTTTAGGTTATTGCGCCATCGTAAGTCCACTGAACTAAAAAAGGCTTCAGC AATCATTGCAGATACTTGCATGCAGCAGGTTAAAGAGATTGCCGCTAGTGCAGACAAGGAGGTTGCTTATTTTGATGCCT ATGACGCCGCCGCCAAAATATGCCAAACATGGGGTGTTATTCCGCCCTACTGGAATGCAGTAAAACGTGATCATATCGAA GATGCTGCCGAGTGCGCCATATTGCGCATGACTTGTGCAAAGTGGTGGGGCAGGCAGTTGCTAAAGTTGCGTGACCAATG CTGTGAGCATTTATGTATTGTTGTCGGCTTAGTTAATCAACACACGCCGTTTGTGAGTGACGAGTGCTTTAGCGAGTGGA CCTCGCAGCAACGTACTGCGATGCAATGGCTCGAAAGCACAATGATTGAAAACGAAGCGGGGGTGATATTGCCGCTGATT GAAGCGGCGATGGCCGGTAATGCGAACCCTTCTAACCGTTTAGTTGAGCTGATTGTGCGTGCTCGTGGCTTAGATGAAAT GGCTGAAGAGTCGGGCAAAATTGGCTTTATGGTCACGCTTACTTGCCCAAGTAAGTTTCACATGAAATCCCACAAATGGG ATTTGAACAACGCCAAAACCGCCCAGCAATATCTGGTAAACGTGTTTGCTAAAATCCGCGCTGCATTAAGTTACCGCAAT ATTCCCTTTACCGGCTGCCGCGTCACTGAGCCGCACAAAGATTCAACCCCGCACTGGCATATGCTGTGTATGGTCAAGCC TGAGCATGAGATGGCAGTAAAAGCCATTATCAAAAAATACGCCTATGAAGTTGACGGCGACGAGCCAGGTGCAAAAGAGC ACCGTTTATTAATCGAAGCGATTGATAAGCAAAAGGGTTGCGCTGTGGGTTACATCATTAAGTACCTTTCAAAAAACATC ATGGGCGAGCATATGCAAGGCGAGTTAGACCTTGAGACGGGCAAGCCTGTTAATGAGGTTGCGCCACGCGCCACAGCTTG GGCTAACCGCCATCGGATCCGCCAGTTTCAATTTTACGGCACATCATCAGTGCAGGTTTGGCGTGAGCTACGCCGGCTAA AAGTTGGGCCGCAATCGCCAGAGATTGAGGCCGCTAAGGCTGCTGCCTGTAACTCTGACTGGAAAGCTTTTGAATATGCG ATGAAAAATGCCCAGCTATCACTTAACTATGAAGTCACCCCGCAGGGGAATGAGTACGGCGAGATGACTAAGCGTGTGCA GGGCATTAGCGGTATTGCCTTTGGCGAAAAGCGCTTAATCATCACCCGTGGCGAGCGCTGGAAACTGCGCAAGGCTAACG ATGATGAGCTGGAGGCATATAGGACGTTAAAGCAACGCCGCAAAGATTTATTTACCGTTAATCGCGCCATGAATGCTGAA AGCCGGCTTTCAAGAAAAGAACTCAAAGACGCTATGCCAAAGTGGAGTATTGCGCTGTTGCCGTTGCCTTTTGGCTCTCC TTGGACTTGTAGGAATAACTGTACAGACCCTGTTTTGGAGGAGGTTGATAGCCGAATTATCAGGCACCTTGCGCAGGTGG GCATTACTGACCCTGCCAACATTGAGCGGTTATTGTTCGTTGGTTGTCGGGTGATGGATGCCGACGGCGGGGAATGGTGG GTTGATGATGGCCAGCTGCGTAACGAACCGTATCGATATCGTGAAATTAGGGATCTTCCGCTCGATAAACTTGTCTCAGA AATGCAGTCGTGGGGAAAAACGACGGAGTATTCAGCATGA
Upstream 100 bases:
>100_bases TTAAGGAGCCGTTCGAGTGCACTTTAGGTGCAGCGTGTCACGTTTCAACCATTACACATAGTAACTTCAGTAAGACAACG AGTGAGAGCTGTAACCCTCA
Downstream 100 bases:
>100_bases AAACACTAATTCAAGGTTGTGAAAGTACCGAGCAGTTTGAGATATTGCTTAAGCTAACGGGCATCACCAGCGAAGATAAA AAGAATGCGCTGCGCGCTCA
Product: replication gene A
Products: NA
Alternate protein names: Fels-2 prophage protein [H]
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MSARTTSNPLPFKRRLQHLPTPLADDVLAAFAVAADRLPAAPIDLWQDEVVAGVREKVDTTRLYQPIFDKPAERFTAAKG FEMLAPLSFHVRNKVQNTYQQRVNSGGIAAGSAYLRETIKKLTVVWHKYPFHKISGMKFVKQPEPVEQDDAVDKDEIENR LLAKASPFSAFRLLRHRKSTELKKASAIIADTCMQQVKEIAASADKEVAYFDAYDAAAKICQTWGVIPPYWNAVKRDHIE DAAECAILRMTCAKWWGRQLLKLRDQCCEHLCIVVGLVNQHTPFVSDECFSEWTSQQRTAMQWLESTMIENEAGVILPLI EAAMAGNANPSNRLVELIVRARGLDEMAEESGKIGFMVTLTCPSKFHMKSHKWDLNNAKTAQQYLVNVFAKIRAALSYRN IPFTGCRVTEPHKDSTPHWHMLCMVKPEHEMAVKAIIKKYAYEVDGDEPGAKEHRLLIEAIDKQKGCAVGYIIKYLSKNI MGEHMQGELDLETGKPVNEVAPRATAWANRHRIRQFQFYGTSSVQVWRELRRLKVGPQSPEIEAAKAAACNSDWKAFEYA MKNAQLSLNYEVTPQGNEYGEMTKRVQGISGIAFGEKRLIITRGERWKLRKANDDELEAYRTLKQRRKDLFTVNRAMNAE SRLSRKELKDAMPKWSIALLPLPFGSPWTCRNNCTDPVLEEVDSRIIRHLAQVGITDPANIERLLFVGCRVMDADGGEWW VDDGQLRNEPYRYREIRDLPLDKLVSEMQSWGKTTEYSA
Sequences:
>Translated_759_residues MSARTTSNPLPFKRRLQHLPTPLADDVLAAFAVAADRLPAAPIDLWQDEVVAGVREKVDTTRLYQPIFDKPAERFTAAKG FEMLAPLSFHVRNKVQNTYQQRVNSGGIAAGSAYLRETIKKLTVVWHKYPFHKISGMKFVKQPEPVEQDDAVDKDEIENR LLAKASPFSAFRLLRHRKSTELKKASAIIADTCMQQVKEIAASADKEVAYFDAYDAAAKICQTWGVIPPYWNAVKRDHIE DAAECAILRMTCAKWWGRQLLKLRDQCCEHLCIVVGLVNQHTPFVSDECFSEWTSQQRTAMQWLESTMIENEAGVILPLI EAAMAGNANPSNRLVELIVRARGLDEMAEESGKIGFMVTLTCPSKFHMKSHKWDLNNAKTAQQYLVNVFAKIRAALSYRN IPFTGCRVTEPHKDSTPHWHMLCMVKPEHEMAVKAIIKKYAYEVDGDEPGAKEHRLLIEAIDKQKGCAVGYIIKYLSKNI MGEHMQGELDLETGKPVNEVAPRATAWANRHRIRQFQFYGTSSVQVWRELRRLKVGPQSPEIEAAKAAACNSDWKAFEYA MKNAQLSLNYEVTPQGNEYGEMTKRVQGISGIAFGEKRLIITRGERWKLRKANDDELEAYRTLKQRRKDLFTVNRAMNAE SRLSRKELKDAMPKWSIALLPLPFGSPWTCRNNCTDPVLEEVDSRIIRHLAQVGITDPANIERLLFVGCRVMDADGGEWW VDDGQLRNEPYRYREIRDLPLDKLVSEMQSWGKTTEYSA >Mature_758_residues SARTTSNPLPFKRRLQHLPTPLADDVLAAFAVAADRLPAAPIDLWQDEVVAGVREKVDTTRLYQPIFDKPAERFTAAKGF EMLAPLSFHVRNKVQNTYQQRVNSGGIAAGSAYLRETIKKLTVVWHKYPFHKISGMKFVKQPEPVEQDDAVDKDEIENRL LAKASPFSAFRLLRHRKSTELKKASAIIADTCMQQVKEIAASADKEVAYFDAYDAAAKICQTWGVIPPYWNAVKRDHIED AAECAILRMTCAKWWGRQLLKLRDQCCEHLCIVVGLVNQHTPFVSDECFSEWTSQQRTAMQWLESTMIENEAGVILPLIE AAMAGNANPSNRLVELIVRARGLDEMAEESGKIGFMVTLTCPSKFHMKSHKWDLNNAKTAQQYLVNVFAKIRAALSYRNI PFTGCRVTEPHKDSTPHWHMLCMVKPEHEMAVKAIIKKYAYEVDGDEPGAKEHRLLIEAIDKQKGCAVGYIIKYLSKNIM GEHMQGELDLETGKPVNEVAPRATAWANRHRIRQFQFYGTSSVQVWRELRRLKVGPQSPEIEAAKAAACNSDWKAFEYAM KNAQLSLNYEVTPQGNEYGEMTKRVQGISGIAFGEKRLIITRGERWKLRKANDDELEAYRTLKQRRKDLFTVNRAMNAES RLSRKELKDAMPKWSIALLPLPFGSPWTCRNNCTDPVLEEVDSRIIRHLAQVGITDPANIERLLFVGCRVMDADGGEWWV DDGQLRNEPYRYREIRDLPLDKLVSEMQSWGKTTEYSA
Specific function: Possible endonuclease which induces a single-strand cut and initiates DNA replication (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage GPA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020220 - InterPro: IPR008766 - ProDom: PD092055 [H]
Pfam domain/function: PF05840 Phage_GPA [H]
EC number: NA
Molecular weight: Translated: 86374; Mature: 86243
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARTTSNPLPFKRRLQHLPTPLADDVLAAFAVAADRLPAAPIDLWQDEVVAGVREKVDT CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TRLYQPIFDKPAERFTAAKGFEMLAPLSFHVRNKVQNTYQQRVNSGGIAAGSAYLRETIK HHHHHHHHCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KLTVVWHKYPFHKISGMKFVKQPEPVEQDDAVDKDEIENRLLAKASPFSAFRLLRHRKST HHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH ELKKASAIIADTCMQQVKEIAASADKEVAYFDAYDAAAKICQTWGVIPPYWNAVKRDHIE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DAAECAILRMTCAKWWGRQLLKLRDQCCEHLCIVVGLVNQHTPFVSDECFSEWTSQQRTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH MQWLESTMIENEAGVILPLIEAAMAGNANPSNRLVELIVRARGLDEMAEESGKIGFMVTL HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEE TCPSKFHMKSHKWDLNNAKTAQQYLVNVFAKIRAALSYRNIPFTGCRVTEPHKDSTPHWH ECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE MLCMVKPEHEMAVKAIIKKYAYEVDGDEPGAKEHRLLIEAIDKQKGCAVGYIIKYLSKNI EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MGEHMQGELDLETGKPVNEVAPRATAWANRHRIRQFQFYGTSSVQVWRELRRLKVGPQSP HCHHCCCCEECCCCCCHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCC EIEAAKAAACNSDWKAFEYAMKNAQLSLNYEVTPQGNEYGEMTKRVQGISGIAFGEKRLI CCHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEE ITRGERWKLRKANDDELEAYRTLKQRRKDLFTVNRAMNAESRLSRKELKDAMPKWSIALL EECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE PLPFGSPWTCRNNCTDPVLEEVDSRIIRHLAQVGITDPANIERLLFVGCRVMDADGGEWW ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCEE VDDGQLRNEPYRYREIRDLPLDKLVSEMQSWGKTTEYSA CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SARTTSNPLPFKRRLQHLPTPLADDVLAAFAVAADRLPAAPIDLWQDEVVAGVREKVDT CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TRLYQPIFDKPAERFTAAKGFEMLAPLSFHVRNKVQNTYQQRVNSGGIAAGSAYLRETIK HHHHHHHHCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KLTVVWHKYPFHKISGMKFVKQPEPVEQDDAVDKDEIENRLLAKASPFSAFRLLRHRKST HHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH ELKKASAIIADTCMQQVKEIAASADKEVAYFDAYDAAAKICQTWGVIPPYWNAVKRDHIE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DAAECAILRMTCAKWWGRQLLKLRDQCCEHLCIVVGLVNQHTPFVSDECFSEWTSQQRTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH MQWLESTMIENEAGVILPLIEAAMAGNANPSNRLVELIVRARGLDEMAEESGKIGFMVTL HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEE TCPSKFHMKSHKWDLNNAKTAQQYLVNVFAKIRAALSYRNIPFTGCRVTEPHKDSTPHWH ECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE MLCMVKPEHEMAVKAIIKKYAYEVDGDEPGAKEHRLLIEAIDKQKGCAVGYIIKYLSKNI EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MGEHMQGELDLETGKPVNEVAPRATAWANRHRIRQFQFYGTSSVQVWRELRRLKVGPQSP HCHHCCCCEECCCCCCHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCC EIEAAKAAACNSDWKAFEYAMKNAQLSLNYEVTPQGNEYGEMTKRVQGISGIAFGEKRLI CCHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEE ITRGERWKLRKANDDELEAYRTLKQRRKDLFTVNRAMNAESRLSRKELKDAMPKWSIALL EECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE PLPFGSPWTCRNNCTDPVLEEVDSRIIRHLAQVGITDPANIERLLFVGCRVMDADGGEWW ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCEE VDDGQLRNEPYRYREIRDLPLDKLVSEMQSWGKTTEYSA CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]