| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876031
Identifier: 160876031
GI number: 160876031
Start: 3469611
End: 3469925
Strand: Reverse
Name: 160876031
Synonym: Sbal195_2921
Alternate gene names: NA
Gene position: 3469925-3469611 (Counterclockwise)
Preceding gene: 160876032
Following gene: 160876030
Centisome position: 64.89
GC content: 48.57
Gene sequence:
>315_bases ATGGCTAGAAAGTCCCATTTGTTTGCGCATTTACTCAGGCACTTTCGTTCCCGTCGGGAAGACCTGCTTACTCTGTTTAG GCAGCATCACGAGGACCCAACCGATCTGAGCTTAATCAAACTTGCAGAGGTATTTGGCGCGCTTGATTGCCTTTACTGGC AGTCGCTTGGCTGTGGTGAAGTGTTGCTGGCTAAAAAAATCGCCCGCACGATTAAGGAGCCGTTCGAGTGCACTTTAGGT GCAGCGTGTCACGTTTCAACCATTACACATAGTAACTTCAGTAAGACAACGAGTGAGAGCTGTAACCCTCAATGA
Upstream 100 bases:
>100_bases GCATTAGCATAGAAGAATTACAGGATGGTGCTCTATGAATGGTCATCAAGCCGTCATTGAATTTAGTCGTCCCACTCACT CTAAAAATGGTGGCTGAGTC
Downstream 100 bases:
>100_bases GCGCGCGCACCACTTCTAATCCACTTCCTTTTAAGCGGCGTTTGCAGCATTTGCCAACGCCGCTTGCTGATGACGTACTG GCAGCATTTGCTGTTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MARKSHLFAHLLRHFRSRREDLLTLFRQHHEDPTDLSLIKLAEVFGALDCLYWQSLGCGEVLLAKKIARTIKEPFECTLG AACHVSTITHSNFSKTTSESCNPQ
Sequences:
>Translated_104_residues MARKSHLFAHLLRHFRSRREDLLTLFRQHHEDPTDLSLIKLAEVFGALDCLYWQSLGCGEVLLAKKIARTIKEPFECTLG AACHVSTITHSNFSKTTSESCNPQ >Mature_103_residues ARKSHLFAHLLRHFRSRREDLLTLFRQHHEDPTDLSLIKLAEVFGALDCLYWQSLGCGEVLLAKKIARTIKEPFECTLGA ACHVSTITHSNFSKTTSESCNPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11825; Mature: 11694
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKSHLFAHLLRHFRSRREDLLTLFRQHHEDPTDLSLIKLAEVFGALDCLYWQSLGCGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH VLLAKKIARTIKEPFECTLGAACHVSTITHSNFSKTTSESCNPQ HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ARKSHLFAHLLRHFRSRREDLLTLFRQHHEDPTDLSLIKLAEVFGALDCLYWQSLGCGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH VLLAKKIARTIKEPFECTLGAACHVSTITHSNFSKTTSESCNPQ HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA