| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876018
Identifier: 160876018
GI number: 160876018
Start: 3456534
End: 3457355
Strand: Reverse
Name: 160876018
Synonym: Sbal195_2908
Alternate gene names: NA
Gene position: 3457355-3456534 (Counterclockwise)
Preceding gene: 160876019
Following gene: 160876017
Centisome position: 64.66
GC content: 52.92
Gene sequence:
>822_bases ATGACCCTAAAAAAAGGCAGCAACGGCTCTCAAGTGCGTGATTTACAACAACGGCTCAATGCCGCTGGCGCGTCATTAAC GGTAGATGGTTGGTTTGGTGATGCAACCCAAAAGGCCATCGAGCAATTCCAAGATAAGCAAGACTTACCGCGCACCGGCT ACGCAGGGGTAAGAACGCTGGCATTACTCGCCGGCGAAAGCCGCAGCAAGTTTATTCAGCACTCACAATTAGCTGACGCT GCAATGGTGCTGAGTGTCTCGTTTGCCGCCATGGCCAGTGTGGCAGAAGTGGAATCCAACGGCTTTGGCTTTTTCGCCTG TGGTAGGCCAACGATTTTATTTGAGCGTCATGTGTTTTATCGCGAGCTGCTGGAACAAGGCGCCGCAGCGGCAGAGCTTG CGGCTAAGTACCCGAATATTTGCAACTCAGCCCGTGGCGGTTACACCGGCGGCAGTGGTGAATATCAACGGTTTGCTATT GCGTACCAGCTTAATCCAGAGGCCGCAATTTGTGCCTGCAGCTGGGGCATGTTTCAGATCATGGGCTTTCATTGGCAAGC CTTGGGCTATCCATCGCCGCAGGCCTTCAAGCAAGCCATGGATACATCAGAGGGGGAACAGCTCCAGGCTTTAGTCAAAT TTATCGAGGCGGATCCTGTGTTACATAAGGCACTCAAAGCGCGTAAGTGGGCAGAGTTTGCCAAGCGCTACAACGGCCCC GCCTATAAAGAGAATGACTACGACATTAAATTAGCGCGCACGTATCAGCAGTTTACTGCCGCGAGTCAGCAGCAGGGCGC CGATAATGTTGTCGCTGCTTAG
Upstream 100 bases:
>100_bases ATGTTGCGCATCTTCTGCAACCAAACTCGAAAAAAGTTGGTAGCAGGCTAGTGCGCATTCCCCGTGCACAAACATTCAAA ACCAAACATAGGTAATTGAC
Downstream 100 bases:
>100_bases CCGGTTTATTCAACCATTTGCAGGCTATTTAATTGTCGCCGCCATCGGGATTACGCTCACCATGGCGGGTGTGATTTATC TGCAGCAAGAGCGACTAAAT
Product: peptidoglycan-binding domain-containing protein
Products: NA
Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein; LysM Domain Protein
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADA AMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAI AYQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP AYKENDYDIKLARTYQQFTAASQQQGADNVVAA
Sequences:
>Translated_273_residues MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADA AMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAI AYQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP AYKENDYDIKLARTYQQFTAASQQQGADNVVAA >Mature_272_residues TLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTLALLAGESRSKFIQHSQLADAA MVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFYRELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIA YQLNPEAAICACSWGMFQIMGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGPA YKENDYDIKLARTYQQFTAASQQQGADNVVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29868; Mature: 29737
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTL CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH ALLAGESRSKFIQHSQLADAAMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHH RELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIAYQLNPEAAICACSWGMFQI HHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHH MGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC AYKENDYDIKLARTYQQFTAASQQQGADNVVAA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLKKGSNGSQVRDLQQRLNAAGASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVRTL CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH ALLAGESRSKFIQHSQLADAAMVLSVSFAAMASVAEVESNGFGFFACGRPTILFERHVFY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHH RELLEQGAAAAELAAKYPNICNSARGGYTGGSGEYQRFAIAYQLNPEAAICACSWGMFQI HHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHH MGFHWQALGYPSPQAFKQAMDTSEGEQLQALVKFIEADPVLHKALKARKWAEFAKRYNGP HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC AYKENDYDIKLARTYQQFTAASQQQGADNVVAA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA