| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876017
Identifier: 160876017
GI number: 160876017
Start: 3456080
End: 3456550
Strand: Reverse
Name: 160876017
Synonym: Sbal195_2907
Alternate gene names: NA
Gene position: 3456550-3456080 (Counterclockwise)
Preceding gene: 160876018
Following gene: 160876016
Centisome position: 64.64
GC content: 49.89
Gene sequence:
>471_bases ATGTTGTCGCTGCTTAGCCGGTTTATTCAACCATTTGCAGGCTATTTAATTGTCGCCGCCATCGGGATTACGCTCACCAT GGCGGGTGTGATTTATCTGCAGCAAGAGCGACTAAATAAATTGCAGCAGACGCAGGGCGCAATGCTGCAATCGCTGACAC AAACATCACAGTCCTATTTTGACTTAAAGCAGCTATCAGCCGAAAACCAGCAAGCGCAGGTAGAGCTACGAACGCAGCTA GCAAGCGTGAACAGCACGAGCCAATACCGAAAAAACAAAATTGAGGAGCTAAAACGTGAACTTAGTGATGTTAAAGTCTG GGCTGATGCTCAGTTGCCTGATGCAATTCGCCGGCTGCACCAGCGCCCCGCCATTAGTGGCAGTGCAGAATACCGTCGTT GGTTGTCCACTCGTGATCCCGTGCCAATTACCCTCGAGCAACCCAATAATCAATCAGGGGATCAGCAGTGA
Upstream 100 bases:
>100_bases CGCTACAACGGCCCCGCCTATAAAGAGAATGACTACGACATTAAATTAGCGCGCACGTATCAGCAGTTTACTGCCGCGAG TCAGCAGCAGGGCGCCGATA
Downstream 100 bases:
>100_bases GCTCGATACCTGTGAAACAGCTTGGCATGACTGCGCCGCGCAAATCGATATGATCATTGACTGCCAGAATAAGCAGAAAG CTAAGCAGCAAGTCAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Lysis Regulatory Protein LysB Family; Prophage Protein; P2 LysB-Like Protein; Lysis-Like Protein; Protein LysB
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLSLLSRFIQPFAGYLIVAAIGITLTMAGVIYLQQERLNKLQQTQGAMLQSLTQTSQSYFDLKQLSAENQQAQVELRTQL ASVNSTSQYRKNKIEELKRELSDVKVWADAQLPDAIRRLHQRPAISGSAEYRRWLSTRDPVPITLEQPNNQSGDQQ
Sequences:
>Translated_156_residues MLSLLSRFIQPFAGYLIVAAIGITLTMAGVIYLQQERLNKLQQTQGAMLQSLTQTSQSYFDLKQLSAENQQAQVELRTQL ASVNSTSQYRKNKIEELKRELSDVKVWADAQLPDAIRRLHQRPAISGSAEYRRWLSTRDPVPITLEQPNNQSGDQQ >Mature_156_residues MLSLLSRFIQPFAGYLIVAAIGITLTMAGVIYLQQERLNKLQQTQGAMLQSLTQTSQSYFDLKQLSAENQQAQVELRTQL ASVNSTSQYRKNKIEELKRELSDVKVWADAQLPDAIRRLHQRPAISGSAEYRRWLSTRDPVPITLEQPNNQSGDQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17718; Mature: 17718
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLLSRFIQPFAGYLIVAAIGITLTMAGVIYLQQERLNKLQQTQGAMLQSLTQTSQSYF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLKQLSAENQQAQVELRTQLASVNSTSQYRKNKIEELKRELSDVKVWADAQLPDAIRRLH HHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QRPAISGSAEYRRWLSTRDPVPITLEQPNNQSGDQQ HCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MLSLLSRFIQPFAGYLIVAAIGITLTMAGVIYLQQERLNKLQQTQGAMLQSLTQTSQSYF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLKQLSAENQQAQVELRTQLASVNSTSQYRKNKIEELKRELSDVKVWADAQLPDAIRRLH HHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QRPAISGSAEYRRWLSTRDPVPITLEQPNNQSGDQQ HCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA