| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875978
Identifier: 160875978
GI number: 160875978
Start: 3418027
End: 3418743
Strand: Direct
Name: 160875978
Synonym: Sbal195_2868
Alternate gene names: NA
Gene position: 3418027-3418743 (Clockwise)
Preceding gene: 160875977
Following gene: 160875979
Centisome position: 63.92
GC content: 44.91
Gene sequence:
>717_bases ATGGAAAAAAATAACATCCTTCCTGCCCTGCTGCTGGGCGGTTTCCTTTGTGCTGGGCTTGTGTATGTTGGTCAGACAGC GAGCACAGCGTTATTGCAGATGAAAGCTATGGAACGCACAGTGACAGTCAAGGGCTTAGCGGAAAAAGAAGTCAAAGCCA ATGTGGCGATTTGGCCAATCAATTTCACTGAGGTCGATAATAATCTGCCTAAACTCTACGAGACGGTTCAGCAAAAAACC GACCGCGTCGTGGCATTTTTAAAGGAACAAGGCTTTAGCGATAGCGAAATTACGATTTCATTACCTTCAATTGAAGATCG CCAAGCCCAAGGTTATGTCGACCCCAACGTCAGATACCGTTACTCGGCAAAGGTGAACCTATCGGTTTATACCCCGCAGA TTGATTTAATGCTCAATACTCGTAAGCAGATGATTAGCTTAGTGAAGGAAGGCATAGCGATCGCCAGCCAAGAGTATGAC AATCGCACCGAATTCCTGTTTACCGATCTCAATTCAGTCAAACCTGTGATGGTACAAGAAGCCACTCAAAATGCCCGTGA AGTGGCGGAAAAATTTGCTAAGGATTCAGATTCTCGCCTCGGAAAAATTAAAACCGCCAGTCAAGGCCAGTTTACTATTT CGGATCGCGATAACAGCACGCCTTACGTTAAACAAATTCGCATTGTGTCCACACTCATCTACTATTTAAATGACTAG
Upstream 100 bases:
>100_bases CCTCAAATCTTAAGCGGCATCTATCCCGAATAAACCCAGTGCATGACTTAGGTTTATTGGGTATCGTAGGCTGAGTTTAT CTAATCAAGAGATTCTTTTT
Downstream 100 bases:
>100_bases ATCTTAGGCTTAGTCGGAAATCACTGAAACGATGGGAATAAGGCACTTATGGGCCTTATTCCTAAATTAGGGAAATACAC TATATTAAATTTTTCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MEKNNILPALLLGGFLCAGLVYVGQTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYVKQIRIVSTLIYYLND
Sequences:
>Translated_238_residues MEKNNILPALLLGGFLCAGLVYVGQTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYVKQIRIVSTLIYYLND >Mature_238_residues MEKNNILPALLLGGFLCAGLVYVGQTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYVKQIRIVSTLIYYLND
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26761; Mature: 26761
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNNILPALLLGGFLCAGLVYVGQTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPI CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCHHHHHHCCEEEEEE NFTEVDNNLPKLYETVQQKTDRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYR EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE YSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYDNRTEFLFTDLNSVKPVMVQE EEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH ATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYVKQIRIVSTLIYYLND HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKNNILPALLLGGFLCAGLVYVGQTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPI CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCHHHHHHCCEEEEEE NFTEVDNNLPKLYETVQQKTDRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYR EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE YSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYDNRTEFLFTDLNSVKPVMVQE EEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH ATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYVKQIRIVSTLIYYLND HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA