| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875969
Identifier: 160875969
GI number: 160875969
Start: 3407394
End: 3408014
Strand: Direct
Name: 160875969
Synonym: Sbal195_2859
Alternate gene names: NA
Gene position: 3407394-3408014 (Clockwise)
Preceding gene: 160875968
Following gene: 160875970
Centisome position: 63.72
GC content: 50.89
Gene sequence:
>621_bases ATGGATCCAGCAACAGTGAATTCAGAAATAGTGACACCAGTGATAGCAAATGCACAGCCTGCGGTCCCTATGGCTACAGC GCCAAACCCAGCGCTAGCGGATCTGCAGGATATCATTCATCCCGATCCAATCGGCGCTTGGCCTTGGGCAATCGGTTATT GGTTGGTCCTCGCGCTAGTGATTGCTCTCATCACACTCTTAGTTATCTGGCTAAGAAAACGCGCCCGTGACTTCGCGCCG AAAAAAGCCGCAAAGCAGTTACTTAATCAGCTCGATAGACAAGCACCGTCCTATGTCTCTGACGTTAATAGCCTATTAAA GCGTACCGCCATGAGTTACCTCAGCAGAGATGCAATAGCCTCCTTAGATGGTGAAGCTTGGGCGACGTGGCTAGACAGCT ATTTACCCGCGCCTAAACGCCAACGTATTGGCCACTTGTTGGCCAAACGTCACCAGCCAACGCCGTTGACCTTAGCTGAA GCCAATGAGTTACATGAACTCGCAAAAGCTTGGTTGGCATCGAAAGCCAAACTGAGTGCGCCTCTGCCGAATCTTGTTCA AGCTAAAAGCCAAGCGCCAATCCAGCCAGCTGACACCAAACAACCGGAGGCACAATGTTAA
Upstream 100 bases:
>100_bases AAAGGGACTTTATCGCCATGATGCAGCAACTGCGCGTGCGCACCCAGCTCATCGATGCGGGTGCTCCCCTAGCCCATCAA TTGGAATTATTGCGTTAACT
Downstream 100 bases:
>100_bases CAATTGCATGGCCTTGGCTATTGATATTACTGCCTTTACCTTTGATTTTTTGGCGCCAACAAACCGTACAAGTGGATGGT GGCCGGCTGCAACTCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MDPATVNSEIVTPVIANAQPAVPMATAPNPALADLQDIIHPDPIGAWPWAIGYWLVLALVIALITLLVIWLRKRARDFAP KKAAKQLLNQLDRQAPSYVSDVNSLLKRTAMSYLSRDAIASLDGEAWATWLDSYLPAPKRQRIGHLLAKRHQPTPLTLAE ANELHELAKAWLASKAKLSAPLPNLVQAKSQAPIQPADTKQPEAQC
Sequences:
>Translated_206_residues MDPATVNSEIVTPVIANAQPAVPMATAPNPALADLQDIIHPDPIGAWPWAIGYWLVLALVIALITLLVIWLRKRARDFAP KKAAKQLLNQLDRQAPSYVSDVNSLLKRTAMSYLSRDAIASLDGEAWATWLDSYLPAPKRQRIGHLLAKRHQPTPLTLAE ANELHELAKAWLASKAKLSAPLPNLVQAKSQAPIQPADTKQPEAQC >Mature_206_residues MDPATVNSEIVTPVIANAQPAVPMATAPNPALADLQDIIHPDPIGAWPWAIGYWLVLALVIALITLLVIWLRKRARDFAP KKAAKQLLNQLDRQAPSYVSDVNSLLKRTAMSYLSRDAIASLDGEAWATWLDSYLPAPKRQRIGHLLAKRHQPTPLTLAE ANELHELAKAWLASKAKLSAPLPNLVQAKSQAPIQPADTKQPEAQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22531; Mature: 22531
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPATVNSEIVTPVIANAQPAVPMATAPNPALADLQDIIHPDPIGAWPWAIGYWLVLALV CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IALITLLVIWLRKRARDFAPKKAAKQLLNQLDRQAPSYVSDVNSLLKRTAMSYLSRDAIA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLDGEAWATWLDSYLPAPKRQRIGHLLAKRHQPTPLTLAEANELHELAKAWLASKAKLSA HCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLPNLVQAKSQAPIQPADTKQPEAQC CCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPATVNSEIVTPVIANAQPAVPMATAPNPALADLQDIIHPDPIGAWPWAIGYWLVLALV CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IALITLLVIWLRKRARDFAPKKAAKQLLNQLDRQAPSYVSDVNSLLKRTAMSYLSRDAIA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLDGEAWATWLDSYLPAPKRQRIGHLLAKRHQPTPLTLAEANELHELAKAWLASKAKLSA HCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLPNLVQAKSQAPIQPADTKQPEAQC CCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA