| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875968
Identifier: 160875968
GI number: 160875968
Start: 3406438
End: 3407391
Strand: Direct
Name: 160875968
Synonym: Sbal195_2858
Alternate gene names: NA
Gene position: 3406438-3407391 (Clockwise)
Preceding gene: 160875967
Following gene: 160875969
Centisome position: 63.7
GC content: 55.03
Gene sequence:
>954_bases ATGAGTGACACTGCGCGACTCTCAGCCTCGGCCGATGGCTTGCCGCTGTTTGCCGATGGCTTGCATTTAACCGAGCAAGA GCTGCTGGCGTGCCAAAATATCGCCCGCGCTATGCCTGAGCGTTACAGCCGTTCCCGCGCTAATTTAGCGGGCCATCGCA GCAGCTTAATCAAAGGCCGCGGGATGGAGTTTGCCGAGGTGCGCCACTATCAACAGGGCGACGATGTGCGCACCATTGAT TGGCGCGTGACCGCTCGCACGGGCAAAACCCACACTAAGTTATTTGTCGAAGAACGCGAGCGCCCTATTCTGTTGTTGAT CGACTTGAGCCAAAGTCTCTATTTTGGCTCAAGTTTATTGCTGCAATCGGTGCAAGCAGGACACCTTGCGACCACCTTAG GTTGGAATGCCATTAACCATGGCGATAGACTCGGCGCCTTGATCGCGTGCGAGTCTGAGCATTTAGAGCTCAAACCCCGC AGCCGTCGTCAGGGCATATTGCAATTGATCTCGGGCCTGCGCCGCGTGCATGAGAATCAACTCAATCATGTTGGCAGTGG CCAGCGCGATCCTGATCATATTCTGCGCGCTTGTCAGCGATTACAACGCATCGCCAAACCCGGTTCCTTGGTTTGGATAG TGACCGATGGCAGCCATTTTAGCTCCCAATGTATCGCGCCATTAACCGAGCTTAAACGTCATTGCGATGTGGGCGCCTAC CTGATTACCGATCCCCTGCGCCAAGGGACACTGCCGTTACCGCACAACTTTAGTTTGCCGGTACGGGATGGGGATGAGGA CTTAGTGCTCACCCGCCACAGTTATCAGGCTTGGCTTGATATCCAGCTGCGTCAGCAAAGGGACTTTATCGCCATGATGC AGCAACTGCGCGTGCGCACCCAGCTCATCGATGCGGGTGCTCCCCTAGCCCATCAATTGGAATTATTGCGTTAA
Upstream 100 bases:
>100_bases CTACCAGGCACAAGCCGAAGGCGTCAGCCGCGATCAGGTGATCAATCACATCTTGAGTCAAGTAGCAGTACCTTAACGGT GAAGATAAAGGTGAAATAAG
Downstream 100 bases:
>100_bases CTATGGATCCAGCAACAGTGAATTCAGAAATAGTGACACCAGTGATAGCAAATGCACAGCCTGCGGTCCCTATGGCTACA GCGCCAAACCCAGCGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSDTARLSASADGLPLFADGLHLTEQELLACQNIARAMPERYSRSRANLAGHRSSLIKGRGMEFAEVRHYQQGDDVRTID WRVTARTGKTHTKLFVEERERPILLLIDLSQSLYFGSSLLLQSVQAGHLATTLGWNAINHGDRLGALIACESEHLELKPR SRRQGILQLISGLRRVHENQLNHVGSGQRDPDHILRACQRLQRIAKPGSLVWIVTDGSHFSSQCIAPLTELKRHCDVGAY LITDPLRQGTLPLPHNFSLPVRDGDEDLVLTRHSYQAWLDIQLRQQRDFIAMMQQLRVRTQLIDAGAPLAHQLELLR
Sequences:
>Translated_317_residues MSDTARLSASADGLPLFADGLHLTEQELLACQNIARAMPERYSRSRANLAGHRSSLIKGRGMEFAEVRHYQQGDDVRTID WRVTARTGKTHTKLFVEERERPILLLIDLSQSLYFGSSLLLQSVQAGHLATTLGWNAINHGDRLGALIACESEHLELKPR SRRQGILQLISGLRRVHENQLNHVGSGQRDPDHILRACQRLQRIAKPGSLVWIVTDGSHFSSQCIAPLTELKRHCDVGAY LITDPLRQGTLPLPHNFSLPVRDGDEDLVLTRHSYQAWLDIQLRQQRDFIAMMQQLRVRTQLIDAGAPLAHQLELLR >Mature_316_residues SDTARLSASADGLPLFADGLHLTEQELLACQNIARAMPERYSRSRANLAGHRSSLIKGRGMEFAEVRHYQQGDDVRTIDW RVTARTGKTHTKLFVEERERPILLLIDLSQSLYFGSSLLLQSVQAGHLATTLGWNAINHGDRLGALIACESEHLELKPRS RRQGILQLISGLRRVHENQLNHVGSGQRDPDHILRACQRLQRIAKPGSLVWIVTDGSHFSSQCIAPLTELKRHCDVGAYL ITDPLRQGTLPLPHNFSLPVRDGDEDLVLTRHSYQAWLDIQLRQQRDFIAMMQQLRVRTQLIDAGAPLAHQLELLR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 35748; Mature: 35617
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTARLSASADGLPLFADGLHLTEQELLACQNIARAMPERYSRSRANLAGHRSSLIKGR CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMEFAEVRHYQQGDDVRTIDWRVTARTGKTHTKLFVEERERPILLLIDLSQSLYFGSSLL CCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHEEEEECCCCCEEEEEECCCHHHHHHHHH LQSVQAGHLATTLGWNAINHGDRLGALIACESEHLELKPRSRRQGILQLISGLRRVHENQ HHHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LNHVGSGQRDPDHILRACQRLQRIAKPGSLVWIVTDGSHFSSQCIAPLTELKRHCDVGAY HHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE LITDPLRQGTLPLPHNFSLPVRDGDEDLVLTRHSYQAWLDIQLRQQRDFIAMMQQLRVRT EEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHH QLIDAGAPLAHQLELLR HHHHCCCCHHHHHHHCC >Mature Secondary Structure SDTARLSASADGLPLFADGLHLTEQELLACQNIARAMPERYSRSRANLAGHRSSLIKGR CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMEFAEVRHYQQGDDVRTIDWRVTARTGKTHTKLFVEERERPILLLIDLSQSLYFGSSLL CCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHEEEEECCCCCEEEEEECCCHHHHHHHHH LQSVQAGHLATTLGWNAINHGDRLGALIACESEHLELKPRSRRQGILQLISGLRRVHENQ HHHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LNHVGSGQRDPDHILRACQRLQRIAKPGSLVWIVTDGSHFSSQCIAPLTELKRHCDVGAY HHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE LITDPLRQGTLPLPHNFSLPVRDGDEDLVLTRHSYQAWLDIQLRQQRDFIAMMQQLRVRT EEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHH QLIDAGAPLAHQLELLR HHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]