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The map label for this gene is dedD [H]

Identifier: 160875944

GI number: 160875944

Start: 3373417

End: 3374169

Strand: Reverse

Name: dedD [H]

Synonym: Sbal195_2834

Alternate gene names: 160875944

Gene position: 3374169-3373417 (Counterclockwise)

Preceding gene: 160875945

Following gene: 160875943

Centisome position: 63.1

GC content: 46.22

Gene sequence:

>753_bases
TTGTCTAGCCAGTTTCATAATCGTTTAGTCGGCACTGTGGTGCTGGTTGCGCTTGGAGTGATTTTTTTGCCGGATATTTT
GGATGGCAAAAAAGATCGCCAAGAAGAGCAATTTTCTGAAATACCTTTGCGTCCGACTGTGATTGAGCAGCAAAAAGCCG
ACGATGATATGTTTGAAGTCTTGTCGGCCGAAGATGCTGCCGCGCTGAGTGGGGCAGATGTCGCCTTAGCTGAGACAGGC
AATAATGCAGACAGTGACAAGTCAGCTGCCATCGCTAAGCAAGACGTTAAGGCGGATGTTAAACCCGAGGTGAAGAAGCC
AGAGGTTAAGCAAGCAGAAGTTAAAAAGCCGGAAGCGAAACCAGAACCTAAAAAAGAGCCACCTAAGGCGACGGTAAAAA
CGGAGCCCGCTAAAAAAGCTGAGACTAAAGCGCCAACCGTCGCTAAGACTGAAAAGCCCAAAGCAGAAACGCCAAAAGCC
AGTGCTGCCAGCCGTGACAGCTTAAAAAGTGGCTTTACCTTGCAGCTTGGCAGTTTTAACAATGCAACCAATGTTAAAGC
CTTGATTGCACAGCTACGTAAGAGTGGTTTTAAAGCGTACACTATCCCTAAAAATCCTAAAGATGGCGTATTAACCAAAG
TGTTTGTCGGGCCAGATGTGTCTGAGGCAAAGCTGAAGAAAATACAAGTTGAGGTGGAAAACCTCACGCGTCTTAAGGGC
TGGATTGTTCCTTTTAATCCCTTAGAATCTTAA

Upstream 100 bases:

>100_bases
GCATTAAAAGCGCAAATTAACCCAGATGATGTGGTAATTGTGTTTGGCTCCTTTTACACTGTGGCAGGTTTTAAGTCTCA
ATTTATGCAGGAAGTCCGTT

Downstream 100 bases:

>100_bases
TGGTGATATAAGATCAGCGACTGAAAATGATTTATTTACCTCTCTAGGGGTGAGAATCGTTTCAGTCTCTGGTAGAATCG
CGCCGTCTTAAAGCCCATGT

Product: sporulation domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKDRQEEQFSEIPLRPTVIEQQKADDDMFEVLSAEDAAALSGADVALAETG
NNADSDKSAAIAKQDVKADVKPEVKKPEVKQAEVKKPEAKPEPKKEPPKATVKTEPAKKAETKAPTVAKTEKPKAETPKA
SAASRDSLKSGFTLQLGSFNNATNVKALIAQLRKSGFKAYTIPKNPKDGVLTKVFVGPDVSEAKLKKIQVEVENLTRLKG
WIVPFNPLES

Sequences:

>Translated_250_residues
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKDRQEEQFSEIPLRPTVIEQQKADDDMFEVLSAEDAAALSGADVALAETG
NNADSDKSAAIAKQDVKADVKPEVKKPEVKQAEVKKPEAKPEPKKEPPKATVKTEPAKKAETKAPTVAKTEKPKAETPKA
SAASRDSLKSGFTLQLGSFNNATNVKALIAQLRKSGFKAYTIPKNPKDGVLTKVFVGPDVSEAKLKKIQVEVENLTRLKG
WIVPFNPLES
>Mature_249_residues
SSQFHNRLVGTVVLVALGVIFLPDILDGKKDRQEEQFSEIPLRPTVIEQQKADDDMFEVLSAEDAAALSGADVALAETGN
NADSDKSAAIAKQDVKADVKPEVKKPEVKQAEVKKPEAKPEPKKEPPKATVKTEPAKKAETKAPTVAKTEKPKAETPKAS
AASRDSLKSGFTLQLGSFNNATNVKALIAQLRKSGFKAYTIPKNPKDGVLTKVFVGPDVSEAKLKKIQVEVENLTRLKGW
IVPFNPLES

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=76, Percent_Identity=36.8421052631579, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 27036; Mature: 26905

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQFHNRLVGTVVLVALGVIFLPDILDGKKDRQEEQFSEIPLRPTVIEQQKADDDMFEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
LSAEDAAALSGADVALAETGNNADSDKSAAIAKQDVKADVKPEVKKPEVKQAEVKKPEAK
HHCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC
PEPKKEPPKATVKTEPAKKAETKAPTVAKTEKPKAETPKASAASRDSLKSGFTLQLGSFN
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHCCCEEEECCCC
NATNVKALIAQLRKSGFKAYTIPKNPKDGVLTKVFVGPDVSEAKLKKIQVEVENLTRLKG
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
WIVPFNPLES
EEECCCCCCC
>Mature Secondary Structure 
SSQFHNRLVGTVVLVALGVIFLPDILDGKKDRQEEQFSEIPLRPTVIEQQKADDDMFEV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
LSAEDAAALSGADVALAETGNNADSDKSAAIAKQDVKADVKPEVKKPEVKQAEVKKPEAK
HHCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC
PEPKKEPPKATVKTEPAKKAETKAPTVAKTEKPKAETPKASAASRDSLKSGFTLQLGSFN
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHCCCEEEECCCC
NATNVKALIAQLRKSGFKAYTIPKNPKDGVLTKVFVGPDVSEAKLKKIQVEVENLTRLKG
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
WIVPFNPLES
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]