Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is folC [H]
Identifier: 160875945
GI number: 160875945
Start: 3374162
End: 3375433
Strand: Reverse
Name: folC [H]
Synonym: Sbal195_2835
Alternate gene names: 160875945
Gene position: 3375433-3374162 (Counterclockwise)
Preceding gene: 160875946
Following gene: 160875944
Centisome position: 63.12
GC content: 50.16
Gene sequence:
>1272_bases ATGCTAACAGCGCCAGCGTCAAATGCAGCATTGGAACAGTGGTTGGATTATTTGTTATCCATACATCCAACCGAAATCGA TATGGGATTAACCCGTGTTTCTAAGGTCGCGCAAACCCTTGGCCTATTAGATTTAGGCCAAAGCAAGATAGTCACAGTGG CAGGGACGAATGGTAAAGGCACGACTTGCGCTATGCTGGAAAATATTCTGCGCTTATCGGGTTTGACTGTGGGCGTATAC AGCTCGCCGCACATGCTGAAATACAACGAGCGAGTGCGTATTAATGGTAGCGATGCTAGTGATAGCGCCTTTGTCGCCGC CTTTGAGCAAATTGAAGCGGCGCGCGCCGAGATTTCCCTGACCTTTTTTGAATACGCCACGCTTGCGGGCCTGATACTGT TTAAAGCCGCTAAGCTGGATGTAGTCATCTTAGAAGTCGGTTTAGGTGGACGGTTAGATGCCACCAATATTATCGATGCC GATATCAGCGTGGTGACGTCGGTCGATTTAGATCATGAAAGTTATCTGGGGAATACCCGCGAACTCGTCGGCCGAGAAAA GGCGGGTATTTTCCGTCACGGTAAAGCTGCGATTGTCGGCGAGCCCAACTTGCCGCATACCGTCAATGATGTTGCCAATG ACGTTGGTGCCATCTTGTATCGCGTCGGCAACGAATTCAGTTATCAAGTCCATGGCAATCTGTGGGACTTTCAAGGCCAA GTGCTCAAACTACACGATTTAGCGTTACCGACCTTGCCGCTACCTAATGCGGCCACGGTATTGGCCGTAATTGAACAGGG TTGGCCGAATATCGCGCCCGCTATTATTGCCCAGGGTATTAGCACAGCTCGGTTAACCGGTCGATTAGAGCGGGTGAGTG AGCAGCCGTTAGTACTACTCGATGTGGCGCATAATCCCCATGCGGCGCGTTTTTTGGTGCAGCAATTAGCGCCAATGGTT GTAGGTAAGCGGGTGTTTGCCCTTTGTGGCATGTTGAAGGATAAAGATATTGCGGGCGTGTTGCCTGTGCTCCATCCTCT GGTCGACACTTGGTATTTAGTGAGTCTTCATGGGGAGCGTGGCGCGAGTTCTGCCATGCTACGCAAAACCTTAGCACCCG AGGCCAGCGCATTTGAGTTTGAGGGCATAGCTGAGGCATGGTCGGCATTAAAAGCGCAAATTAACCCAGATGATGTGGTA ATTGTGTTTGGCTCCTTTTACACTGTGGCAGGTTTTAAGTCTCAATTTATGCAGGAAGTCCGTTTTGTCTAG
Upstream 100 bases:
>100_bases CAGAACAATATCAATTGCCTAAGCTCGCCCTTGGGCCATTATTCATGTTGGATTGAAAAGATCTTATTTGAGAGATTATC GAATACGAGGATGTACGGAC
Downstream 100 bases:
>100_bases CCAGTTTCATAATCGTTTAGTCGGCACTGTGGTGCTGGTTGCGCTTGGAGTGATTTTTTTGCCGGATATTTTGGATGGCA AAAAAGATCGCCAAGAAGAG
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MLTAPASNAALEQWLDYLLSIHPTEIDMGLTRVSKVAQTLGLLDLGQSKIVTVAGTNGKGTTCAMLENILRLSGLTVGVY SSPHMLKYNERVRINGSDASDSAFVAAFEQIEAARAEISLTFFEYATLAGLILFKAAKLDVVILEVGLGGRLDATNIIDA DISVVTSVDLDHESYLGNTRELVGREKAGIFRHGKAAIVGEPNLPHTVNDVANDVGAILYRVGNEFSYQVHGNLWDFQGQ VLKLHDLALPTLPLPNAATVLAVIEQGWPNIAPAIIAQGISTARLTGRLERVSEQPLVLLDVAHNPHAARFLVQQLAPMV VGKRVFALCGMLKDKDIAGVLPVLHPLVDTWYLVSLHGERGASSAMLRKTLAPEASAFEFEGIAEAWSALKAQINPDDVV IVFGSFYTVAGFKSQFMQEVRFV
Sequences:
>Translated_423_residues MLTAPASNAALEQWLDYLLSIHPTEIDMGLTRVSKVAQTLGLLDLGQSKIVTVAGTNGKGTTCAMLENILRLSGLTVGVY SSPHMLKYNERVRINGSDASDSAFVAAFEQIEAARAEISLTFFEYATLAGLILFKAAKLDVVILEVGLGGRLDATNIIDA DISVVTSVDLDHESYLGNTRELVGREKAGIFRHGKAAIVGEPNLPHTVNDVANDVGAILYRVGNEFSYQVHGNLWDFQGQ VLKLHDLALPTLPLPNAATVLAVIEQGWPNIAPAIIAQGISTARLTGRLERVSEQPLVLLDVAHNPHAARFLVQQLAPMV VGKRVFALCGMLKDKDIAGVLPVLHPLVDTWYLVSLHGERGASSAMLRKTLAPEASAFEFEGIAEAWSALKAQINPDDVV IVFGSFYTVAGFKSQFMQEVRFV >Mature_423_residues MLTAPASNAALEQWLDYLLSIHPTEIDMGLTRVSKVAQTLGLLDLGQSKIVTVAGTNGKGTTCAMLENILRLSGLTVGVY SSPHMLKYNERVRINGSDASDSAFVAAFEQIEAARAEISLTFFEYATLAGLILFKAAKLDVVILEVGLGGRLDATNIIDA DISVVTSVDLDHESYLGNTRELVGREKAGIFRHGKAAIVGEPNLPHTVNDVANDVGAILYRVGNEFSYQVHGNLWDFQGQ VLKLHDLALPTLPLPNAATVLAVIEQGWPNIAPAIIAQGISTARLTGRLERVSEQPLVLLDVAHNPHAARFLVQQLAPMV VGKRVFALCGMLKDKDIAGVLPVLHPLVDTWYLVSLHGERGASSAMLRKTLAPEASAFEFEGIAEAWSALKAQINPDDVV IVFGSFYTVAGFKSQFMQEVRFV
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=187, Percent_Identity=38.5026737967914, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI66932990, Length=187, Percent_Identity=38.5026737967914, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI1788654, Length=406, Percent_Identity=51.9704433497537, Blast_Score=389, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71984923, Length=174, Percent_Identity=35.632183908046, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17553150, Length=174, Percent_Identity=35.632183908046, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17553148, Length=174, Percent_Identity=35.632183908046, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323760, Length=355, Percent_Identity=29.2957746478873, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6324815, Length=181, Percent_Identity=32.0441988950276, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24641571, Length=263, Percent_Identity=31.1787072243346, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24581568, Length=213, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 45661; Mature: 45661
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1 ; PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAPASNAALEQWLDYLLSIHPTEIDMGLTRVSKVAQTLGLLDLGQSKIVTVAGTNGKG CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC TTCAMLENILRLSGLTVGVYSSPHMLKYNERVRINGSDASDSAFVAAFEQIEAARAEISL CHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHEEE TFFEYATLAGLILFKAAKLDVVILEVGLGGRLDATNIIDADISVVTSVDLDHESYLGNTR HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCEEEEEEECCCHHHHCCCHH ELVGREKAGIFRHGKAAIVGEPNLPHTVNDVANDVGAILYRVGNEFSYQVHGNLWDFQGQ HHHCCHHCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCC VLKLHDLALPTLPLPNAATVLAVIEQGWPNIAPAIIAQGISTARLTGRLERVSEQPLVLL EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEE DVAHNPHAARFLVQQLAPMVVGKRVFALCGMLKDKDIAGVLPVLHPLVDTWYLVSLHGER EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCC GASSAMLRKTLAPEASAFEFEGIAEAWSALKAQINPDDVVIVFGSFYTVAGFKSQFMQEV CCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH RFV CCC >Mature Secondary Structure MLTAPASNAALEQWLDYLLSIHPTEIDMGLTRVSKVAQTLGLLDLGQSKIVTVAGTNGKG CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC TTCAMLENILRLSGLTVGVYSSPHMLKYNERVRINGSDASDSAFVAAFEQIEAARAEISL CHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHEEE TFFEYATLAGLILFKAAKLDVVILEVGLGGRLDATNIIDADISVVTSVDLDHESYLGNTR HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCEEEEEEECCCHHHHCCCHH ELVGREKAGIFRHGKAAIVGEPNLPHTVNDVANDVGAILYRVGNEFSYQVHGNLWDFQGQ HHHCCHHCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCC VLKLHDLALPTLPLPNAATVLAVIEQGWPNIAPAIIAQGISTARLTGRLERVSEQPLVLL EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEE DVAHNPHAARFLVQQLAPMVVGKRVFALCGMLKDKDIAGVLPVLHPLVDTWYLVSLHGER EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCC GASSAMLRKTLAPEASAFEFEGIAEAWSALKAQINPDDVVIVFGSFYTVAGFKSQFMQEV CCHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH RFV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]