| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is rhbF [H]
Identifier: 160875922
GI number: 160875922
Start: 3345737
End: 3347665
Strand: Direct
Name: rhbF [H]
Synonym: Sbal195_2811
Alternate gene names: 160875922
Gene position: 3345737-3347665 (Clockwise)
Preceding gene: 160875921
Following gene: 160875923
Centisome position: 62.57
GC content: 49.46
Gene sequence:
>1929_bases ATGAACTTACCCACAAAAGCCTTACTAATGGATCCATTGACAACGCAGGATCATCAAACTCACGCAGCGGCGACTCAACT CACCCCTTCGCTGTCGACAACCTCAACTTCTATGCCGGAGCACTTGACCCCCGCCTATTGGCAAGCGGCTAATCGGCATT TAGTGAAGAAAATTCTCTGCGAATTCACCCACGAGAAAATCATCACGCCGACCCTATACGGGCAAAAAGCAGGGCTTAAC CACTATGAACTGCGGCTCAAAAACAGCACTTACTATTTTAGTGCACGGCACTATCAGCTCGATCATCTTGCTATCGATGC AGATTCCATCCGCGTTTCAGTCGCAGGACAAGAGCAAGCCCTCGATGCGATGTCGCTGATCATTTCCCTTAAAAATGACT TAGGGATCAGTGAAACCTTACTGCCCACGTATTTAGAGGAAATCACTAGCACCCTCTACAGCAAGGCGTACAAGTTAGCG CATCAGGCGATTCCCGCTGCCACGCTGGCGCGAGCCGATTATCAGAGCATAGAAGCAGGTATGACAGAAGGTCATCCGGT GTTTATTGCCAATAACGGTCGGATTGGCTTTGATATGCAGGATTACCGTCAATTTGCCCCAGAAAGTGCGATGCCGATGC AGTTAGTCTGGCTTGGCGTGCGCAAGAGTAAGACCACGTTTGCCGCCCTCGAAAACTTGAGTCACGACGCGTTACTCAAG GAGGAGCTTGGCCAGCAGTTCACTGACTTCCAACAACGTCTTAAAGCCCAGCAGCATGATCCGCAGGACTTCTACTTTAT GCCTGTGCATCCTTGGCAGTGGCGTGAAAAAATCGCCCGCGTCTTTGCCGGCGACATCGCCCGTGGCGATCTGGTTTATC TTGGCGAAGGCAGTCAACAGTACCAAGTACAGCAATCGATACGCACTTTCTTCAATCTTTCATCGCCACAAAAGTGCTAT GTCAAAACCGCGCTTTCCATCTTAAACATGGGCTTTATGCGCGGCCTGTCGCCCCTATACATGAGCTGCACACCGCAAAT TAATGCATGGGTGGCGAACTTGGTTGAGAGCGACCCTTACTTTACTCAGCAAGGGTTTGTGATCCTTAAAGAAATTGCCG CCATAGGTTACCACCACCATTATTACGAGCAGGCACTCACCCAAGACAGCGCCTACAAAAAAATGCTCTCTGCCCTATGG CGCGAAAGCCCACTGCCGCACATTGCGCCTAAGCAAAATCTGATGACCATGGCTGCCCTACTGCACACGGATCATGAAGA TAAAGCGCTGATTTCAGCCTTGATAACGGCCTCAGGCTTGCCAGCCAAAGACTGGTTGAGCCGTTACCTCAACTTGTATC TGTCGCCCTTATTGCACGCGTTTTTTGCCTACGATCTGGTCTTTATGCCCCATGGTGAAAACCTGATCTTAGTGCTGGAT GAATATGTGCCGGTCAAGATTTTAATGAAAGACATAGGCGAAGAAGTCGCGGTACTCAATGGCACCTCGCCGCTGCCTGA TGATGTAAAACGCCTTGCGGTAAGCCTTGAAGAAGAGATGAAGCTTAACTACATTTTACTGGATATTTTTGACTGTATTT TCCGCTATTTAGCACCGCTGCTTGATGAGCAAACCAGCGTCAGTGAAAGCCAATTCTGGGAATTAGTGGCGGACAATGTA CGTGATTACCAAGCTCAGCATCCGCATTTGGCCGCCAAGTTTGCCCAATACGATCTGTTTAAGGACAGCTTTGTACGCAC CTGCCTTAATCGTATCCAATTGAATAACAACCAACAAATGATAGACCTCGCCGACAGGGAGAAAAACCTACGCTTCGCTG GCGGTATCGACAATCCCTTGGCGGCCTTTAGGCAAAGTCATGCCTTTAAGCGCCCCAAACTTGGCAGCGCTGAGTCGAAA ACACGTTAA
Upstream 100 bases:
>100_bases CTCTTCGACGGGCTTAGTCCAGACAACTTCAGCGCTGCCAAGCTCGCTCGCGGCGCCCGTAACCTCTCCCATGACATTAT CGACTCTTTAGGTGAACTAG
Downstream 100 bases:
>100_bases CGCGCAACAAAGCAAATAGACCCGACACTTTCTGAAACTTGACGAAACGTTTGTGTGGGCCACTTGTTGGCCCGCATTAT TAACCCCAACCTAAATGGAA
Product: IucA/IucC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MNLPTKALLMDPLTTQDHQTHAAATQLTPSLSTTSTSMPEHLTPAYWQAANRHLVKKILCEFTHEKIITPTLYGQKAGLN HYELRLKNSTYYFSARHYQLDHLAIDADSIRVSVAGQEQALDAMSLIISLKNDLGISETLLPTYLEEITSTLYSKAYKLA HQAIPAATLARADYQSIEAGMTEGHPVFIANNGRIGFDMQDYRQFAPESAMPMQLVWLGVRKSKTTFAALENLSHDALLK EELGQQFTDFQQRLKAQQHDPQDFYFMPVHPWQWREKIARVFAGDIARGDLVYLGEGSQQYQVQQSIRTFFNLSSPQKCY VKTALSILNMGFMRGLSPLYMSCTPQINAWVANLVESDPYFTQQGFVILKEIAAIGYHHHYYEQALTQDSAYKKMLSALW RESPLPHIAPKQNLMTMAALLHTDHEDKALISALITASGLPAKDWLSRYLNLYLSPLLHAFFAYDLVFMPHGENLILVLD EYVPVKILMKDIGEEVAVLNGTSPLPDDVKRLAVSLEEEMKLNYILLDIFDCIFRYLAPLLDEQTSVSESQFWELVADNV RDYQAQHPHLAAKFAQYDLFKDSFVRTCLNRIQLNNNQQMIDLADREKNLRFAGGIDNPLAAFRQSHAFKRPKLGSAESK TR
Sequences:
>Translated_642_residues MNLPTKALLMDPLTTQDHQTHAAATQLTPSLSTTSTSMPEHLTPAYWQAANRHLVKKILCEFTHEKIITPTLYGQKAGLN HYELRLKNSTYYFSARHYQLDHLAIDADSIRVSVAGQEQALDAMSLIISLKNDLGISETLLPTYLEEITSTLYSKAYKLA HQAIPAATLARADYQSIEAGMTEGHPVFIANNGRIGFDMQDYRQFAPESAMPMQLVWLGVRKSKTTFAALENLSHDALLK EELGQQFTDFQQRLKAQQHDPQDFYFMPVHPWQWREKIARVFAGDIARGDLVYLGEGSQQYQVQQSIRTFFNLSSPQKCY VKTALSILNMGFMRGLSPLYMSCTPQINAWVANLVESDPYFTQQGFVILKEIAAIGYHHHYYEQALTQDSAYKKMLSALW RESPLPHIAPKQNLMTMAALLHTDHEDKALISALITASGLPAKDWLSRYLNLYLSPLLHAFFAYDLVFMPHGENLILVLD EYVPVKILMKDIGEEVAVLNGTSPLPDDVKRLAVSLEEEMKLNYILLDIFDCIFRYLAPLLDEQTSVSESQFWELVADNV RDYQAQHPHLAAKFAQYDLFKDSFVRTCLNRIQLNNNQQMIDLADREKNLRFAGGIDNPLAAFRQSHAFKRPKLGSAESK TR >Mature_642_residues MNLPTKALLMDPLTTQDHQTHAAATQLTPSLSTTSTSMPEHLTPAYWQAANRHLVKKILCEFTHEKIITPTLYGQKAGLN HYELRLKNSTYYFSARHYQLDHLAIDADSIRVSVAGQEQALDAMSLIISLKNDLGISETLLPTYLEEITSTLYSKAYKLA HQAIPAATLARADYQSIEAGMTEGHPVFIANNGRIGFDMQDYRQFAPESAMPMQLVWLGVRKSKTTFAALENLSHDALLK EELGQQFTDFQQRLKAQQHDPQDFYFMPVHPWQWREKIARVFAGDIARGDLVYLGEGSQQYQVQQSIRTFFNLSSPQKCY VKTALSILNMGFMRGLSPLYMSCTPQINAWVANLVESDPYFTQQGFVILKEIAAIGYHHHYYEQALTQDSAYKKMLSALW RESPLPHIAPKQNLMTMAALLHTDHEDKALISALITASGLPAKDWLSRYLNLYLSPLLHAFFAYDLVFMPHGENLILVLD EYVPVKILMKDIGEEVAVLNGTSPLPDDVKRLAVSLEEEMKLNYILLDIFDCIFRYLAPLLDEQTSVSESQFWELVADNV RDYQAQHPHLAAKFAQYDLFKDSFVRTCLNRIQLNNNQQMIDLADREKNLRFAGGIDNPLAAFRQSHAFKRPKLGSAESK TR
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 72962; Mature: 72962
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPTKALLMDPLTTQDHQTHAAATQLTPSLSTTSTSMPEHLTPAYWQAANRHLVKKILC CCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EFTHEKIITPTLYGQKAGLNHYELRLKNSTYYFSARHYQLDHLAIDADSIRVSVAGQEQA HHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEEECCCEEEEECCHHHH LDAMSLIISLKNDLGISETLLPTYLEEITSTLYSKAYKLAHQAIPAATLARADYQSIEAG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC MTEGHPVFIANNGRIGFDMQDYRQFAPESAMPMQLVWLGVRKSKTTFAALENLSHDALLK CCCCCEEEEECCCEECCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHH EELGQQFTDFQQRLKAQQHDPQDFYFMPVHPWQWREKIARVFAGDIARGDLVYLGEGSQQ HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHH YQVQQSIRTFFNLSSPQKCYVKTALSILNMGFMRGLSPLYMSCTPQINAWVANLVESDPY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCC FTQQGFVILKEIAAIGYHHHYYEQALTQDSAYKKMLSALWRESPLPHIAPKQNLMTMAAL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LHTDHEDKALISALITASGLPAKDWLSRYLNLYLSPLLHAFFAYDLVFMPHGENLILVLD HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEC EYVPVKILMKDIGEEVAVLNGTSPLPDDVKRLAVSLEEEMKLNYILLDIFDCIFRYLAPL CCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEQTSVSESQFWELVADNVRDYQAQHPHLAAKFAQYDLFKDSFVRTCLNRIQLNNNQQM HCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IDLADREKNLRFAGGIDNPLAAFRQSHAFKRPKLGSAESKTR EEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLPTKALLMDPLTTQDHQTHAAATQLTPSLSTTSTSMPEHLTPAYWQAANRHLVKKILC CCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EFTHEKIITPTLYGQKAGLNHYELRLKNSTYYFSARHYQLDHLAIDADSIRVSVAGQEQA HHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEEECCCEEEEECCHHHH LDAMSLIISLKNDLGISETLLPTYLEEITSTLYSKAYKLAHQAIPAATLARADYQSIEAG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC MTEGHPVFIANNGRIGFDMQDYRQFAPESAMPMQLVWLGVRKSKTTFAALENLSHDALLK CCCCCEEEEECCCEECCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHH EELGQQFTDFQQRLKAQQHDPQDFYFMPVHPWQWREKIARVFAGDIARGDLVYLGEGSQQ HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHH YQVQQSIRTFFNLSSPQKCYVKTALSILNMGFMRGLSPLYMSCTPQINAWVANLVESDPY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCC FTQQGFVILKEIAAIGYHHHYYEQALTQDSAYKKMLSALWRESPLPHIAPKQNLMTMAAL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LHTDHEDKALISALITASGLPAKDWLSRYLNLYLSPLLHAFFAYDLVFMPHGENLILVLD HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEC EYVPVKILMKDIGEEVAVLNGTSPLPDDVKRLAVSLEEEMKLNYILLDIFDCIFRYLAPL CCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEQTSVSESQFWELVADNVRDYQAQHPHLAAKFAQYDLFKDSFVRTCLNRIQLNNNQQM HCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IDLADREKNLRFAGGIDNPLAAFRQSHAFKRPKLGSAESKTR EEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]