| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yeeZ [H]
Identifier: 160875866
GI number: 160875866
Start: 3275519
End: 3276382
Strand: Reverse
Name: yeeZ [H]
Synonym: Sbal195_2755
Alternate gene names: 160875866
Gene position: 3276382-3275519 (Counterclockwise)
Preceding gene: 160875867
Following gene: 160875865
Centisome position: 61.27
GC content: 49.54
Gene sequence:
>864_bases ATGGCGAATGTAAAAGCAGAAAACGGCGCAGTAAAATCCAGTGTTGCCTTGGTCGGTTGTGGATGGTTTGGTTTTGCTTT AGCAAAGCAGCTTGTCCATGAGGGCTATAGAGTCACAGGCTGTAAGCGCAGCGCCGACGAATTATCGGCATTAACTGAGG TAGGGATTGATGCCTATCCGCTGCAATTGGGCAGCGAAGCACCCTTTGCCCCGGATGCTCAGGCATTAAGCGGTTTATTT CAAACCGATTATCTAGTGGTCAATATTCCTCCCCGATTAAAGCGCGGTAACGCCGCGTATCTTGAAGAACTGCAACAACT CATCGCATTAACCCAAGGCTGGCAATATCAGCAGATTGTGTTTATCAGCACTACGGGCGTGTATCCGGCCAAAGATAAAG TGATGACCGAAGCCGATGCCTTGGCAGAATCTAGCGACAGCCAAGTGCTATTAGATGCAGAAGCTTTATTCCAAGCCTTG CCCCATGCCTGTATTGTCCGCTTTGCTGGACTCGTAGGCCCCAAACGTCATCCTGGACGTTTTCTTGCCGGAAAAACCGA TGTCAGTGGCGCCAATGTGGCAGTGAATTTAGTCCACTTAAGTGATTGTGTCAGCGCGGTAAGTCAGATTCTCGCGGCAA CGGGTTCAGGTTTATCTGTGGCACCGATTTATAATCTTTGCGCGCCGACACACCCCACTAAAGCTGAGTTTTATCAAGCC GCCGCCGAGTCCCTTGGTTTAGTCGCGCCCGAATTTAATCAACAATCCATGCCGAGTAAAGTCATCCAAGGTGACGCAAT TGTCACAGATTTAGGCTTTCGATATCAGTATGCTTCCCCGCTGGATATGCTAGCGGCATGTTGA
Upstream 100 bases:
>100_bases TCGATAAAGGGGTTAGTTTCTATTTTAGTTCGCTACAAACTTGAATCTTATGCGCTAAGTTCCGTATTCTATCTGCTGAT ATGATTCCCTTAGGGCTAAT
Downstream 100 bases:
>100_bases GAAAGGTTAATTATTGTTAAAGGTAAAAGCCGAACTTTTAGGTTATCTTTGGGTTCCAAGTTTTGCTTGAGCGAATGTGT CATCCTTATTTAAACCAATG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MANVKAENGAVKSSVALVGCGWFGFALAKQLVHEGYRVTGCKRSADELSALTEVGIDAYPLQLGSEAPFAPDAQALSGLF QTDYLVVNIPPRLKRGNAAYLEELQQLIALTQGWQYQQIVFISTTGVYPAKDKVMTEADALAESSDSQVLLDAEALFQAL PHACIVRFAGLVGPKRHPGRFLAGKTDVSGANVAVNLVHLSDCVSAVSQILAATGSGLSVAPIYNLCAPTHPTKAEFYQA AAESLGLVAPEFNQQSMPSKVIQGDAIVTDLGFRYQYASPLDMLAAC
Sequences:
>Translated_287_residues MANVKAENGAVKSSVALVGCGWFGFALAKQLVHEGYRVTGCKRSADELSALTEVGIDAYPLQLGSEAPFAPDAQALSGLF QTDYLVVNIPPRLKRGNAAYLEELQQLIALTQGWQYQQIVFISTTGVYPAKDKVMTEADALAESSDSQVLLDAEALFQAL PHACIVRFAGLVGPKRHPGRFLAGKTDVSGANVAVNLVHLSDCVSAVSQILAATGSGLSVAPIYNLCAPTHPTKAEFYQA AAESLGLVAPEFNQQSMPSKVIQGDAIVTDLGFRYQYASPLDMLAAC >Mature_286_residues ANVKAENGAVKSSVALVGCGWFGFALAKQLVHEGYRVTGCKRSADELSALTEVGIDAYPLQLGSEAPFAPDAQALSGLFQ TDYLVVNIPPRLKRGNAAYLEELQQLIALTQGWQYQQIVFISTTGVYPAKDKVMTEADALAESSDSQVLLDAEALFQALP HACIVRFAGLVGPKRHPGRFLAGKTDVSGANVAVNLVHLSDCVSAVSQILAATGSGLSVAPIYNLCAPTHPTKAEFYQAA AESLGLVAPEFNQQSMPSKVIQGDAIVTDLGFRYQYASPLDMLAAC
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=277, Percent_Identity=39.3501805054152, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 30407; Mature: 30276
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVKAENGAVKSSVALVGCGWFGFALAKQLVHEGYRVTGCKRSADELSALTEVGIDAYP CCCCCCCCCCCHHCEEEEECHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCEE LQLGSEAPFAPDAQALSGLFQTDYLVVNIPPRLKRGNAAYLEELQQLIALTQGWQYQQIV ECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE FISTTGVYPAKDKVMTEADALAESSDSQVLLDAEALFQALPHACIVRFAGLVGPKRHPGR EEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC FLAGKTDVSGANVAVNLVHLSDCVSAVSQILAATGSGLSVAPIYNLCAPTHPTKAEFYQA EECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHH AAESLGLVAPEFNQQSMPSKVIQGDAIVTDLGFRYQYASPLDMLAAC HHHHCCCCCCCCCCCCCCHHHHCCCEEEEECCCEEECCCCHHHHHCC >Mature Secondary Structure ANVKAENGAVKSSVALVGCGWFGFALAKQLVHEGYRVTGCKRSADELSALTEVGIDAYP CCCCCCCCCCHHCEEEEECHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCEE LQLGSEAPFAPDAQALSGLFQTDYLVVNIPPRLKRGNAAYLEELQQLIALTQGWQYQQIV ECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE FISTTGVYPAKDKVMTEADALAESSDSQVLLDAEALFQALPHACIVRFAGLVGPKRHPGR EEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC FLAGKTDVSGANVAVNLVHLSDCVSAVSQILAATGSGLSVAPIYNLCAPTHPTKAEFYQA EECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHH AAESLGLVAPEFNQQSMPSKVIQGDAIVTDLGFRYQYASPLDMLAAC HHHHCCCCCCCCCCCCCCHHHHCCCEEEEECCCEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]