Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is dsbA [H]

Identifier: 160875865

GI number: 160875865

Start: 3274776

End: 3275396

Strand: Reverse

Name: dsbA [H]

Synonym: Sbal195_2754

Alternate gene names: 160875865

Gene position: 3275396-3274776 (Counterclockwise)

Preceding gene: 160875866

Following gene: 160875864

Centisome position: 61.25

GC content: 49.6

Gene sequence:

>621_bases
ATGAGCGTGTTTAATCGAGTTCGACCTATAGCCGCATTGGCGTGCGGATTAATGCTGAGTGCCAGCTTTGCACTGCAGGC
CGCAAGTTTCGAAGAAGGCAAAGATTACGTCACTGTGGCGGGGATTACCGAAGCGCAAAAGCCAGTGCTACGAGAGTTTT
TTTCCTATAACTGCCCACATTGCTATAAGCAAGAACCGCTTATGGACTTGACAGTGCAACTGCTCGGCAAAGACGTGGCT
TTTGAGCGTACCCCTGTGGGCGCTGGTCGTCCTGCTTGGGAGCTGAGTCAGCTTGCCTACTATGTGGCGCAAAAATTAAA
GATGACTAAACAAACCCATGGCGCTATTTTCAAGCAAATCCATGAGAAAGGTGAGCAATTTACTGCGCCTGAACAGGTTA
AAGCCTTCTTTGTCGCCCAGGGCGCTAAAGTGGGGGATGTTGATGCCGCGATGAATTCCGTCGATGCCAAATTTACCCTA
ATGAATTATGACTCTCAAGCTGAGCTTGCTGGGATCAAGGGCGTACCCTCATTACTGGTTAATGGCCGTTATATGCTGAC
GTCGACCGCGCACACGCCAGAAGAGTTGGCGGCATTAGTTAAGTTTTTAGCCGCGAAGTAA

Upstream 100 bases:

>100_bases
GTAAAAGCCGAACTTTTAGGTTATCTTTGGGTTCCAAGTTTTGCTTGAGCGAATGTGTCATCCTTATTTAAACCAATGAC
GAATAAAAAGAGACAATATA

Downstream 100 bases:

>100_bases
CCGCGTTTAATAAATTGCGACTTGACTCATCGCGGCTAACGAATAAGCGCCTTGCGAGCCGCATTGGGAAACTTATCCCG
CTATTCGCTAATCCAGCGTT

Product: DSBA oxidoreductase

Products: 3-oxo-D 4-steroid; protein with oxidized disulfide bonds [C]

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVA
FERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVGDVDAAMNSVDAKFTL
MNYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK

Sequences:

>Translated_206_residues
MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVA
FERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVGDVDAAMNSVDAKFTL
MNYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK
>Mature_205_residues
SVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVAF
ERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVGDVDAAMNSVDAKFTLM
NYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK

Specific function: Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790291, Length=212, Percent_Identity=28.3018867924528, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR023205
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22515; Mature: 22384

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
CYKQEPLMDLTVQLLGKDVAFERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQI
CCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEKGEQFTAPEQVKAFFVAQGAKVGDVDAAMNSVDAKFTLMNYDSQAELAGIKGVPSLLV
HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHCCCCCHHHHH
NGRYMLTSTAHTPEELAALVKFLAAK
CCEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPH
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
CYKQEPLMDLTVQLLGKDVAFERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQI
CCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEKGEQFTAPEQVKAFFVAQGAKVGDVDAAMNSVDAKFTLMNYDSQAELAGIKGVPSLLV
HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHCCCCCHHHHH
NGRYMLTSTAHTPEELAALVKFLAAK
CCEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-oxo-D 5-steroid; protein with reduced SH groups [C]

Specific reaction: 3-oxo-D 5-steroid = 3-oxo-D 4-steroid protein with reduced SH groups = protein with oxidized disulfide bonds [C]

General reaction: Isomerases; Intramolecular Oxidoreductases; Transposing S-S Bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA