| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yccT [C]
Identifier: 160875856
GI number: 160875856
Start: 3258112
End: 3258870
Strand: Direct
Name: yccT [C]
Synonym: Sbal195_2745
Alternate gene names: 160875856
Gene position: 3258112-3258870 (Clockwise)
Preceding gene: 160875855
Following gene: 160875858
Centisome position: 60.93
GC content: 46.51
Gene sequence:
>759_bases ATGAAATATCAATCAATCTTATGTGCCACCGCGTTAATGCTGGTTGCAGTGCAGCCTGCAACGGCCGATGTTAATCTCAA TCTGCCTAAAAATGCTGAAGTGTTAACGGTCAATGGCAAGCCAGCCGTAAAGAGTGGCAACCTCGTTTTAGCCGATGGTA TCAATCAGATAGCCTTTCGCTATGCCGCGCAATACAGGCAGCAAGCTGACTCAGTGCATTATCTATCCGACGTGCTCATC GTCCGTTTTGATGCGTCAGCACAAACACTTACCCTGACACTTCCCGCCATCAACTCCGCTAGAGATGCCAAGAAATTTGA TGAGTCACCCAAATTGACACTATCAAATGCTCAAGATGAAGCAGTGAGTTTTACCAGCGATAAATTGATTAAGAATGGGA TCCAACTGGGACGGGATTTCGAACACGAGATACTGCAGTACAACCTTAGCAATCATCCGGCTTCATTAAATCTCACTATG AATACCGCGACAACACAAGCAAACGACGCCATTGCACCAATATTGGCAAGCCAGTCACAAATACGCCAAACAGCAGCAGT CACATCCACGAACTTGATCGCGCCAGCAGTGATGTCGTCAGCTGCCGCAGCGGTAAATGACAAGGCTCAGCCAACGACTT CAGTGACATCTACAACCGCACCTAGCCAAGCTGAAATCAGTCAAATGCTTGATTACTGGTACAAACAAGCCAACGACAGC ACCAAAGCCAGCTTCAAAGCCAAAATCAATAAAGAATAA
Upstream 100 bases:
>100_bases CTACCGATTAAATTAACGCTAATCTGCGCGCTATAAACGGCGTGTCGCCAAATATCTACCTTATTATTTAGCGGCGTCCT CGCAACAACAGAGAAAGCTT
Downstream 100 bases:
>100_bases CCCATAGAACACGCCCGCGTTGTAGAGGATATTTGTCCTCCAACCATTAACAACGCTTCGGCTATCTATTTCAGACCGCC AGCTTAGTATCACTATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKYQSILCATALMLVAVQPATADVNLNLPKNAEVLTVNGKPAVKSGNLVLADGINQIAFRYAAQYRQQADSVHYLSDVLI VRFDASAQTLTLTLPAINSARDAKKFDESPKLTLSNAQDEAVSFTSDKLIKNGIQLGRDFEHEILQYNLSNHPASLNLTM NTATTQANDAIAPILASQSQIRQTAAVTSTNLIAPAVMSSAAAAVNDKAQPTTSVTSTTAPSQAEISQMLDYWYKQANDS TKASFKAKINKE
Sequences:
>Translated_252_residues MKYQSILCATALMLVAVQPATADVNLNLPKNAEVLTVNGKPAVKSGNLVLADGINQIAFRYAAQYRQQADSVHYLSDVLI VRFDASAQTLTLTLPAINSARDAKKFDESPKLTLSNAQDEAVSFTSDKLIKNGIQLGRDFEHEILQYNLSNHPASLNLTM NTATTQANDAIAPILASQSQIRQTAAVTSTNLIAPAVMSSAAAAVNDKAQPTTSVTSTTAPSQAEISQMLDYWYKQANDS TKASFKAKINKE >Mature_252_residues MKYQSILCATALMLVAVQPATADVNLNLPKNAEVLTVNGKPAVKSGNLVLADGINQIAFRYAAQYRQQADSVHYLSDVLI VRFDASAQTLTLTLPAINSARDAKKFDESPKLTLSNAQDEAVSFTSDKLIKNGIQLGRDFEHEILQYNLSNHPASLNLTM NTATTQANDAIAPILASQSQIRQTAAVTSTNLIAPAVMSSAAAAVNDKAQPTTSVTSTTAPSQAEISQMLDYWYKQANDS TKASFKAKINKE
Specific function: Unknown
COG id: COG3110
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0319 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018635 [H]
Pfam domain/function: PF09829 DUF2057 [H]
EC number: NA
Molecular weight: Translated: 27077; Mature: 27077
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQSILCATALMLVAVQPATADVNLNLPKNAEVLTVNGKPAVKSGNLVLADGINQIAFR CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECCHHHHHHH YAAQYRQQADSVHYLSDVLIVRFDASAQTLTLTLPAINSARDAKKFDESPKLTLSNAQDE HHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCEEECCCCCH AVSFTSDKLIKNGIQLGRDFEHEILQYNLSNHPASLNLTMNTATTQANDAIAPILASQSQ HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHCHHH IRQTAAVTSTNLIAPAVMSSAAAAVNDKAQPTTSVTSTTAPSQAEISQMLDYWYKQANDS HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC TKASFKAKINKE CCEEEEEECCCC >Mature Secondary Structure MKYQSILCATALMLVAVQPATADVNLNLPKNAEVLTVNGKPAVKSGNLVLADGINQIAFR CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECCHHHHHHH YAAQYRQQADSVHYLSDVLIVRFDASAQTLTLTLPAINSARDAKKFDESPKLTLSNAQDE HHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCEEECCCCCH AVSFTSDKLIKNGIQLGRDFEHEILQYNLSNHPASLNLTMNTATTQANDAIAPILASQSQ HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHCHHH IRQTAAVTSTNLIAPAVMSSAAAAVNDKAQPTTSVTSTTAPSQAEISQMLDYWYKQANDS HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC TKASFKAKINKE CCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA