| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is dcp [H]
Identifier: 160875850
GI number: 160875850
Start: 3248536
End: 3250740
Strand: Direct
Name: dcp [H]
Synonym: Sbal195_2739
Alternate gene names: 160875850
Gene position: 3248536-3250740 (Clockwise)
Preceding gene: 160875845
Following gene: 160875851
Centisome position: 60.75
GC content: 48.84
Gene sequence:
>2205_bases ATGAAGGGACTAACCCTTAAAGCGCAAGCCCGCACGGCTACGCTCACGCTGAGTGCCATCGCTTTAGCCTTAACTTTGGG CGCTTGTAGCACACAACAGCCCGAAGCCAGTGTTCAAGCCAACGCGGCGCCCAATGCCGTGTCGGCGCAGATTATCAGTC AGAATGCGACCAATCCATTCTTTAAACCCTATGATACGTTTATGGAAATTCCGGCCTTTGATAAGATCAAGCCAGAGCAT TTCCTCCCAGCCTTTAAAGCGGGCGTGGCTCAGCAACACGAGCAAATTCAAGCGATTGTTGATAATAAAGCCAAACCCAC CTTCGCCAATACCATTGAAGCTATGGAGTTTTCTGGCGATCTAGTGACCCGCGTATCTAACGTCTTCTTTAACCTGACAG GCGCCGATACTACGCCAGCATTGCAAGCCCTCTCCAAAGAAGTGTCGCCTATGTTATCGTCCGCCGAAGACGATATCTTG CTCAATGACAAACTGTTCCAAAAAGTTAAAGCTGTTTACGACGCGAAAGACAACCTAAAACTCAGCACAGCCCAAGCCAA ATTGCTGGAAGATACCTATAAATCTTTCACCCGTGGCGGCGCTAACTTAAGCGAGCAAGATAAAACCAAACTGCGCGCAT TGAACGAAGAAATCGGTAAACTCAATTTAGCCTTTGGTGACAATCTATTAGCCGAAACCAATGCCTTCGAATTAGTGGTT GATAGCAAAGCCGATCTCACTGGTTTACCAGAAGATGTGATTGCGACCGCCTTTGAAACCGCCAAAAAACGTGGCCATGA AGGCAAGTGGGTATTCACCACTTCTCGCCCTTCTATCACGCCATTTTTAACCTATGCTGATAACCGCCAGTTACGTGAAA AACTCTATAAAGGCTATATCGAGCGCGGTAACAACAATAACGCCAACGATAACAAGATTATCCTCGCGAAGATTGCCGCC CTGCGTGCTGAACGTGCTCAGTTGATGGGCTATAAAACCCATGCCGATTTCGTGTTAGAAGAACGCACGGCTAAAACGCC AGAAAACGTTTACGGCTTGCTCAACAAAGTATGGCCAGCGGCATTGGCCCAAGCCAAAACCGAAGTGGCTGATATGCAAG CCATGATCGACGCGCAGGGTGGCAAATTTAAGCTGCAAGCGTGGGACTGGGATTACTACGCCGACAAAATTCGTGTCGCT AAGTACAGCTTTAACGAGCAACAAACCCGCCCGTATTTCTCTCTCGACAGTACACTAAAAGGTGTGTTCTACACGGCTAA CCGTTTGTACGGTTTGACCTTTAAAGAACGTACCGACTTACCCAAATACAATGCAGAAGTCCGTACTTGGGAAGTTTACG ATAAAGACGGCAAGCTGATGGCCATCTTTATGGGTGACTATTTCACCCGCGACAGCAAACGTGGCGGCGCTTGGATGAAT TCCTTCCGCAAGCAATACCATATGAATGGCGTTGATTCTAAACCTATTATTGTTAACGTATTGAACTACCCTCGCCCAGC GGGCAATGAGCCAGCGCTGCTGACCTTCGATGAAGCCAGCACCCTATTCCACGAATTTGGCCACGCCCTACACGGCATGT TATCGAACGTGGAATATCGCTCACAGGGTGGCACCGCCGTACCTCGCGATTACGTTGAGTTCCCATCGCAAGTGAATGAA AACTGGATGACTCAGCCAGAAGTGTTAGCCCAATTTGCCAAGCACTACAAAACCGGCGAAGTGATCCCGCAAGAGCTAGT AAAGAAAATCCAAGCGGCCAGCAAGTTCAACCAAGGCTTTGCCACCGTTGAATACATGGCGGCCACTAAGCTCGATTTAG ATTGGCACACATTAACCGACACCACGCCAAAGGATGCGGCCAAGTTTGAAGCGGACTCGTTAGCGGCAATGGGACTGATT GAAGAAATCAGCCCACGCTATCGCAGCACTTACTTCTCGCATATTTTCGCAGGCGGTTATTCTGCAGGCTACTACAGCTA CCTGTGGTCGGATATTTTAGGCGCGGATGCTTTCGAAGCCTTTAAAGAAAACGGCATTTTCGACAAGGCCACTGCGGATT CCTTCCGTAATAATATCCTGTCGAAAGGCGGCAGCGATGATCCTATGCTGATGTATAAAAACTTCCGCGGTAAAGAAGCT GGCATAGAGCCGCTGCTGCGTAGCCGTGGATTACTGGCAGAGTAA
Upstream 100 bases:
>100_bases TAATGGTTTTAGCCGCGCGTAGACTTCAATTTTTGCTGAAATCCATGGCCATCATCAAACAATCACCCATAACAATAATC GACCTAACGGGGAACAAATA
Downstream 100 bases:
>100_bases TCGCTAATCATTTGCCAAAGGCAAGATAAACAACGGGAGCTTCGGCTCCCGTTTTCTTATAATTTTATTCAGCAACTTCT ACAATAACCTATTAATTGGC
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MKGLTLKAQARTATLTLSAIALALTLGACSTQQPEASVQANAAPNAVSAQIISQNATNPFFKPYDTFMEIPAFDKIKPEH FLPAFKAGVAQQHEQIQAIVDNKAKPTFANTIEAMEFSGDLVTRVSNVFFNLTGADTTPALQALSKEVSPMLSSAEDDIL LNDKLFQKVKAVYDAKDNLKLSTAQAKLLEDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVV DSKADLTGLPEDVIATAFETAKKRGHEGKWVFTTSRPSITPFLTYADNRQLREKLYKGYIERGNNNNANDNKIILAKIAA LRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPAALAQAKTEVADMQAMIDAQGGKFKLQAWDWDYYADKIRVA KYSFNEQQTRPYFSLDSTLKGVFYTANRLYGLTFKERTDLPKYNAEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMN SFRKQYHMNGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYRSQGGTAVPRDYVEFPSQVNE NWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGFATVEYMAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLI EEISPRYRSTYFSHIFAGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADSFRNNILSKGGSDDPMLMYKNFRGKEA GIEPLLRSRGLLAE
Sequences:
>Translated_734_residues MKGLTLKAQARTATLTLSAIALALTLGACSTQQPEASVQANAAPNAVSAQIISQNATNPFFKPYDTFMEIPAFDKIKPEH FLPAFKAGVAQQHEQIQAIVDNKAKPTFANTIEAMEFSGDLVTRVSNVFFNLTGADTTPALQALSKEVSPMLSSAEDDIL LNDKLFQKVKAVYDAKDNLKLSTAQAKLLEDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVV DSKADLTGLPEDVIATAFETAKKRGHEGKWVFTTSRPSITPFLTYADNRQLREKLYKGYIERGNNNNANDNKIILAKIAA LRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPAALAQAKTEVADMQAMIDAQGGKFKLQAWDWDYYADKIRVA KYSFNEQQTRPYFSLDSTLKGVFYTANRLYGLTFKERTDLPKYNAEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMN SFRKQYHMNGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYRSQGGTAVPRDYVEFPSQVNE NWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGFATVEYMAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLI EEISPRYRSTYFSHIFAGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADSFRNNILSKGGSDDPMLMYKNFRGKEA GIEPLLRSRGLLAE >Mature_734_residues MKGLTLKAQARTATLTLSAIALALTLGACSTQQPEASVQANAAPNAVSAQIISQNATNPFFKPYDTFMEIPAFDKIKPEH FLPAFKAGVAQQHEQIQAIVDNKAKPTFANTIEAMEFSGDLVTRVSNVFFNLTGADTTPALQALSKEVSPMLSSAEDDIL LNDKLFQKVKAVYDAKDNLKLSTAQAKLLEDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVV DSKADLTGLPEDVIATAFETAKKRGHEGKWVFTTSRPSITPFLTYADNRQLREKLYKGYIERGNNNNANDNKIILAKIAA LRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPAALAQAKTEVADMQAMIDAQGGKFKLQAWDWDYYADKIRVA KYSFNEQQTRPYFSLDSTLKGVFYTANRLYGLTFKERTDLPKYNAEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMN SFRKQYHMNGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYRSQGGTAVPRDYVEFPSQVNE NWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGFATVEYMAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLI EEISPRYRSTYFSHIFAGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADSFRNNILSKGGSDDPMLMYKNFRGKEA GIEPLLRSRGLLAE
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=600, Percent_Identity=28.1666666666667, Blast_Score=262, Evalue=1e-69, Organism=Homo sapiens, GI14149738, Length=602, Percent_Identity=30.3986710963455, Blast_Score=249, Evalue=8e-66, Organism=Homo sapiens, GI156105687, Length=657, Percent_Identity=25.7229832572298, Blast_Score=166, Evalue=7e-41, Organism=Escherichia coli, GI1787819, Length=677, Percent_Identity=42.3929098966027, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI1789913, Length=686, Percent_Identity=34.9854227405248, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI71999758, Length=588, Percent_Identity=24.3197278911565, Blast_Score=111, Evalue=2e-24, Organism=Caenorhabditis elegans, GI32565901, Length=614, Percent_Identity=20.6840390879479, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319793, Length=649, Percent_Identity=26.6563944530046, Blast_Score=203, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6322715, Length=467, Percent_Identity=23.5546038543897, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI20129717, Length=567, Percent_Identity=24.5149911816578, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21356111, Length=548, Percent_Identity=21.7153284671533, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 81921; Mature: 81921
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLTLKAQARTATLTLSAIALALTLGACSTQQPEASVQANAAPNAVSAQIISQNATNPF CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCC FKPYDTFMEIPAFDKIKPEHFLPAFKAGVAQQHEQIQAIVDNKAKPTFANTIEAMEFSGD CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH LVTRVSNVFFNLTGADTTPALQALSKEVSPMLSSAEDDILLNDKLFQKVKAVYDAKDNLK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCE LSTAQAKLLEDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVV EHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHCCCCCEEEEE DSKADLTGLPEDVIATAFETAKKRGHEGKWVFTTSRPSITPFLTYADNRQLREKLYKGYI ECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH ERGNNNNANDNKIILAKIAALRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPA HCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH ALAQAKTEVADMQAMIDAQGGKFKLQAWDWDYYADKIRVAKYSFNEQQTRPYFSLDSTLK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCEEEEEEECCCCHHCCCEEEHHHHHH GVFYTANRLYGLTFKERTDLPKYNAEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMN HHEEECCCEEEEEEHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHCCCCCCCCHHHH SFRKQYHMNGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYR HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEC SQGGTAVPRDYVEFPSQVNENWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGF CCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC ATVEYMAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLIEEISPRYRSTYFSHIFAGGY HHEEEHHHEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC SAGYYSYLWSDILGADAFEAFKENGIFDKATADSFRNNILSKGGSDDPMLMYKNFRGKEA CCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC GIEPLLRSRGLLAE CHHHHHHCCCCCCC >Mature Secondary Structure MKGLTLKAQARTATLTLSAIALALTLGACSTQQPEASVQANAAPNAVSAQIISQNATNPF CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCC FKPYDTFMEIPAFDKIKPEHFLPAFKAGVAQQHEQIQAIVDNKAKPTFANTIEAMEFSGD CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH LVTRVSNVFFNLTGADTTPALQALSKEVSPMLSSAEDDILLNDKLFQKVKAVYDAKDNLK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCE LSTAQAKLLEDTYKSFTRGGANLSEQDKTKLRALNEEIGKLNLAFGDNLLAETNAFELVV EHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHCCCCCEEEEE DSKADLTGLPEDVIATAFETAKKRGHEGKWVFTTSRPSITPFLTYADNRQLREKLYKGYI ECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH ERGNNNNANDNKIILAKIAALRAERAQLMGYKTHADFVLEERTAKTPENVYGLLNKVWPA HCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH ALAQAKTEVADMQAMIDAQGGKFKLQAWDWDYYADKIRVAKYSFNEQQTRPYFSLDSTLK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCEEEEEEECCCCHHCCCEEEHHHHHH GVFYTANRLYGLTFKERTDLPKYNAEVRTWEVYDKDGKLMAIFMGDYFTRDSKRGGAWMN HHEEECCCEEEEEEHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHCCCCCCCCHHHH SFRKQYHMNGVDSKPIIVNVLNYPRPAGNEPALLTFDEASTLFHEFGHALHGMLSNVEYR HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEC SQGGTAVPRDYVEFPSQVNENWMTQPEVLAQFAKHYKTGEVIPQELVKKIQAASKFNQGF CCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC ATVEYMAATKLDLDWHTLTDTTPKDAAKFEADSLAAMGLIEEISPRYRSTYFSHIFAGGY HHEEEHHHEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC SAGYYSYLWSDILGADAFEAFKENGIFDKATADSFRNNILSKGGSDDPMLMYKNFRGKEA CCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC GIEPLLRSRGLLAE CHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]