| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875847
Identifier: 160875847
GI number: 160875847
Start: 3243509
End: 3244627
Strand: Reverse
Name: 160875847
Synonym: Sbal195_2735
Alternate gene names: NA
Gene position: 3244627-3243509 (Counterclockwise)
Preceding gene: 160875848
Following gene: 160875846
Centisome position: 60.68
GC content: 50.94
Gene sequence:
>1119_bases ATGGCAACCTCCTACCATGTAAGCGATATCCTTCATCAGCACTTAGCCCACTATCAACAGCAGCATAAACTGACCGAACA ACAAGCCTTAGTCTGCCAGCATATTCAACAGTGTCGCACGCAAGCCTTGGGCATACAGCAATGGCGTTGTGATACTTGTC ACTATGAGCAGCAGCTGTTTTGCTCCTGTGGTGACCGGCATTGCCCTCGCTGTCAGGGAAGGCAGACGCAAGCGTGGATT GCTACGCAGCAGGCGCAAGTCTTGCCTTGCCGCTATTTCCACTTGGTCTTTACCTTACCCCACGAGTTGAACATCTTGGC GCACTACGCTGCCAAGTCGTTATACAGCGCCCTGTTTGAGTCTGTGTGGCAGACGCTTGCGCAGTTTGGCATGAAACGGA AACACCTTCAGGGGCAATTGGGTTGCACTATGGTGCTGCACACGTGGGGGCAAACCTTGAGTCAACATATCCACTTGCAT TGCTTAATTCCAGGCGGGGTAGTGACCTCAGAGGGGGATTGGCATGGCGTGAAAACGGATTATCTGTTTCCGGTTAGAGC CTTGTCCACCGTATATCGGGCCAAGTTATTACGGGCGCTGCGACAACATGAGCTGGCTATCCCTGCGGCTGAAACCTTAA TGGCAAAGCCGTGGTGTGTTTACAGCAAAGCGTGTCTGAGCCGCGCCGAAACCGTGGTGGAATATCTCGGGCGTTATACC CGTAAAGGCATGCTACATGAGTCAAGAATTGCAGAAGTGACCGCAGAGCATGTCAGTTTTCACTACAAGGATTATCGTGA CGGTCAGCAGCATAAGCAAATGCGGCTAAGCTGTGATGAGTTTATCCGCCGTTACTTATTGCATGTATTGCCCAAAGGGC TGATGCGAGTGAGACATTTTGGTTTTCTCGCCAATGCTTGCCGCCGCAAAAAGCTGGCGCTCATCCAGCGGCAACTACGT AAGCCGCAGGTGGTATTGGCGAGTCCTTTGATTAAGGAGGAATGTTGGTGGTCATGTCCGCAATGCCAGTTAGGTCATTT GCAGTTTATTGGGGAGATAAGACTGCAGAGATTAGTGATGATTAACAACCAAAGTCAGCCAGTACGTCTGTCAGGATAA
Upstream 100 bases:
>100_bases TTGGTCATCACAGTATTAAATCCACCGAGCGCTACTTGCATTGGTCGCCGGAATTGGGTCATCAAGGCTGTGACTTGCTA GCAAGTCTTGGGGGGATGCC
Downstream 100 bases:
>100_bases CCACTCCCTCAAGACGTAGCGTAACCGACAGCGAAAAGCAACCAGCCTTATGGGCACAAGCCGATGAGGGGATGTGGTGT GAGAGTGAGCCTGAGTCTGG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MATSYHVSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQALGIQQWRCDTCHYEQQLFCSCGDRHCPRCQGRQTQAWI ATQQAQVLPCRYFHLVFTLPHELNILAHYAAKSLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH CLIPGGVVTSEGDWHGVKTDYLFPVRALSTVYRAKLLRALRQHELAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT RKGMLHESRIAEVTAEHVSFHYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLR KPQVVLASPLIKEECWWSCPQCQLGHLQFIGEIRLQRLVMINNQSQPVRLSG
Sequences:
>Translated_372_residues MATSYHVSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQALGIQQWRCDTCHYEQQLFCSCGDRHCPRCQGRQTQAWI ATQQAQVLPCRYFHLVFTLPHELNILAHYAAKSLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH CLIPGGVVTSEGDWHGVKTDYLFPVRALSTVYRAKLLRALRQHELAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT RKGMLHESRIAEVTAEHVSFHYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLR KPQVVLASPLIKEECWWSCPQCQLGHLQFIGEIRLQRLVMINNQSQPVRLSG >Mature_371_residues ATSYHVSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQALGIQQWRCDTCHYEQQLFCSCGDRHCPRCQGRQTQAWIA TQQAQVLPCRYFHLVFTLPHELNILAHYAAKSLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHC LIPGGVVTSEGDWHGVKTDYLFPVRALSTVYRAKLLRALRQHELAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYTR KGMLHESRIAEVTAEHVSFHYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLRK PQVVLASPLIKEECWWSCPQCQLGHLQFIGEIRLQRLVMINNQSQPVRLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 43250; Mature: 43119
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSYHVSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQALGIQQWRCDTCHYEQQLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH CSCGDRHCPRCQGRQTQAWIATQQAQVLPCRYFHLVFTLPHELNILAHYAAKSLYSALFE HHCCCCCCCCCCCCCCHHHHHHCCCHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVVTSEGDWHGVKTD HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEECCCCCCCCCCC YLFPVRALSTVYRAKLLRALRQHELAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGMLHESRIAEVTAEHVSFHYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF HCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFLANACRRKKLALIQRQLRKPQVVLASPLIKEECWWSCPQCQLGHLQFIGEIRLQRLVM HHHHHHHHHHHHHHHHHHHCCCCEEHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHE INNQSQPVRLSG ECCCCCCEEECC >Mature Secondary Structure ATSYHVSDILHQHLAHYQQQHKLTEQQALVCQHIQQCRTQALGIQQWRCDTCHYEQQLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH CSCGDRHCPRCQGRQTQAWIATQQAQVLPCRYFHLVFTLPHELNILAHYAAKSLYSALFE HHCCCCCCCCCCCCCCHHHHHHCCCHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVVTSEGDWHGVKTD HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEECCCCCCCCCCC YLFPVRALSTVYRAKLLRALRQHELAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGMLHESRIAEVTAEHVSFHYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF HCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFLANACRRKKLALIQRQLRKPQVVLASPLIKEECWWSCPQCQLGHLQFIGEIRLQRLVM HHHHHHHHHHHHHHHHHHHCCCCEEHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHE INNQSQPVRLSG ECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]