| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875846
Identifier: 160875846
GI number: 160875846
Start: 3242550
End: 3243158
Strand: Reverse
Name: 160875846
Synonym: Sbal195_2734
Alternate gene names: NA
Gene position: 3243158-3242550 (Counterclockwise)
Preceding gene: 160875847
Following gene: 160875844
Centisome position: 60.65
GC content: 37.27
Gene sequence:
>609_bases GTGGTGTTTGAGAGTATTGCGATCTATTCAGGATTAATTGCAACAATCTGGATATTCATTGGTGTTTATGTAGCAAGTAG GTTTTATGCTGGTTACAGCCATTCAAAGCAATTTTGTAGTGAGTTAGGTGCGACTGGTAGCCCAACTGAAAAATTGTCTC CTTTAATTAATAATTATCCTCTTGGTTTTCTATTTTGCTTTTTCGGTTGGTATCTGGCTCAACTCTCAAATGTTTCAACT TTAGTGAATATTGCTGGTTGGTTAGTTATAGCTCATGGTGTTGGTACATGGGTCGCCGGTTACTTCCCAATGGACGCCGA TCCATTTACTAAGAATCCAACTTTTAATTGTAAGGTACATTCTTGGGCAGGTTTTATCATGTTGCTTTCATTAGTTGTAG CACCAATATTAATTGCTATCAGTCCAACAACTGAAATTATTCCATTATATTTCCGCATTTTTTCATTGGTTTCTGTTGTC GCTGCTGTTTATTTTCTTTTCGCAATGGCTAAAGCTGTAAAATCCCAAAGCAATCCTGGCATCCATCAGCGTATTTCATA TGGCTTTCAGCTAATTTGGCTAAGTGCTTTTTCACTAGTATTGGCGTAA
Upstream 100 bases:
>100_bases TTTACACGGATGTGGCAGCGGCCAAGTCCAACAAGCGATTTATGCCCTGCAAACAGCGCAGCGCATAAATACTAAGACGT TAGTTTACAAAGGGAGTTTG
Downstream 100 bases:
>100_bases TTGTAAACTAACAAGCAAATTAATCAGGACAAATAACTGTTGGTTTTTGCTCCTGCGTCGCTTATTTTAACCAACTGATA TTTGCCCATTATTTGGGCGT
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVFESIAIYSGLIATIWIFIGVYVASRFYAGYSHSKQFCSELGATGSPTEKLSPLINNYPLGFLFCFFGWYLAQLSNVST LVNIAGWLVIAHGVGTWVAGYFPMDADPFTKNPTFNCKVHSWAGFIMLLSLVVAPILIAISPTTEIIPLYFRIFSLVSVV AAVYFLFAMAKAVKSQSNPGIHQRISYGFQLIWLSAFSLVLA
Sequences:
>Translated_202_residues MVFESIAIYSGLIATIWIFIGVYVASRFYAGYSHSKQFCSELGATGSPTEKLSPLINNYPLGFLFCFFGWYLAQLSNVST LVNIAGWLVIAHGVGTWVAGYFPMDADPFTKNPTFNCKVHSWAGFIMLLSLVVAPILIAISPTTEIIPLYFRIFSLVSVV AAVYFLFAMAKAVKSQSNPGIHQRISYGFQLIWLSAFSLVLA >Mature_202_residues MVFESIAIYSGLIATIWIFIGVYVASRFYAGYSHSKQFCSELGATGSPTEKLSPLINNYPLGFLFCFFGWYLAQLSNVST LVNIAGWLVIAHGVGTWVAGYFPMDADPFTKNPTFNCKVHSWAGFIMLLSLVVAPILIAISPTTEIIPLYFRIFSLVSVV AAVYFLFAMAKAVKSQSNPGIHQRISYGFQLIWLSAFSLVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22277; Mature: 22277
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFESIAIYSGLIATIWIFIGVYVASRFYAGYSHSKQFCSELGATGSPTEKLSPLINNYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC LGFLFCFFGWYLAQLSNVSTLVNIAGWLVIAHGVGTWVAGYFPMDADPFTKNPTFNCKVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEH SWAGFIMLLSLVVAPILIAISPTTEIIPLYFRIFSLVSVVAAVYFLFAMAKAVKSQSNPG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IHQRISYGFQLIWLSAFSLVLA HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVFESIAIYSGLIATIWIFIGVYVASRFYAGYSHSKQFCSELGATGSPTEKLSPLINNYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC LGFLFCFFGWYLAQLSNVSTLVNIAGWLVIAHGVGTWVAGYFPMDADPFTKNPTFNCKVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEH SWAGFIMLLSLVVAPILIAISPTTEIIPLYFRIFSLVSVVAAVYFLFAMAKAVKSQSNPG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IHQRISYGFQLIWLSAFSLVLA HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA