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The map label for this gene is yeeY [H]

Identifier: 160875839

GI number: 160875839

Start: 3233399

End: 3234313

Strand: Reverse

Name: yeeY [H]

Synonym: Sbal195_2727

Alternate gene names: 160875839

Gene position: 3234313-3233399 (Counterclockwise)

Preceding gene: 160875842

Following gene: 160875838

Centisome position: 60.49

GC content: 46.89

Gene sequence:

>915_bases
ATGCGCATCGATATTGATGCTTTTAATGTGCTGCAAGTGCTGGTGGAAGAGGGCAGTTTTGCCAAGGCGGCGGAGCGGTT
ACACAAGGCGCAATCGGCGGTGAGTTATCAAGTTAAAAAGTTAGAAGAGCACTTAGGTGTGCAGCTTTTTAGCCGTGAGC
AATATCGTGCTGAGCTGACGCAAGAGGGCCGGGTGATTTTGGCCGAGGGGCGAAGATTGTTGCAACACCTTGCAAACATT
GAACATCTTGCCAGCCGTTTTAGTGAAGGTTGGGAGCCAAAGTTAGAGCTAGTGATAGATGGAGCCTTGCCGATGGAGCC
AATTATGACGGCTTTAAAGCGCATGGCTGAACATCAAATCCCCACTAAAATTCAGCTCAATATGGAATTTTTAGGCGGCG
TACAACATAGATTCGAGCGGGATAATGCCGACTTGATGTTAGTGAAAGATTATCGCACTGGCCCCTATTATCATCCGCAA
CCTTTGCCAGCCATCACCAGTGTGCTGGTGGCAAGTGCTTCGCATCCTTTGTCTTTTATTCGCGAAATTAGTTTGTCTGA
ACTGCAGCAACACGTGGAATTGACTATCGAAGACTCTTCGCCCAATAAAAGTTACCGCGATGAAATGCAATTTGGCGGCG
ATAAAGTGTTTTATCTTTCAGGCTTTATCATGAAAAAGAACGCCTTGTTAAAAGGCTTAGGTTTTGGCTGGTTGCCGGAT
TTTCTAGCGCAAGAAGAGTTGGCGAAGGGGGAGTTAGTTGAAATCGACTTTGTCGGTGGCAGCCGTTTTACCTTTATTCC
ACAGCTTGTCTCGACCTTAGAGCGGCCATTAGGCCGTGCGGGACAACTTTTTACCGAGTTGATATTAGAGGAGTTTGCAA
AGGCTGAGCAGTTTAATGGTGTGGGTTTAGGTTGA

Upstream 100 bases:

>100_bases
AATAATAAATCCGTTATCTCAATCTAAAAATTAGATGGTATTCTAATCTTTACGAATCGTAGTGTTTCCGTGACATGTTC
ATAAGAGCCAAGGAGTGACC

Downstream 100 bases:

>100_bases
ATAAGCCGCCGTTTGTCATCTTTTGATACAAGTCATCGCATAAAATAATCGCATTTTGACATTTTATGTCATAAATTAAG
CTCTAGATTAACAGTGAAAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLAQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGLG

Sequences:

>Translated_304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLAQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGLG
>Mature_304_residues
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELTQEGRVILAEGRRLLQHLANI
EHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQ
PLPAITSVLVASASHPLSFIREISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
FLAQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNGVGLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=304, Percent_Identity=26.9736842105263, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1789492, Length=254, Percent_Identity=28.3464566929134, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786508, Length=240, Percent_Identity=27.5, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786713, Length=254, Percent_Identity=27.1653543307087, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787949, Length=254, Percent_Identity=24.4094488188976, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786401, Length=264, Percent_Identity=28.030303030303, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082132, Length=267, Percent_Identity=25.8426966292135, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34339; Mature: 34339

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELT
CEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QEGRVILAEGRRLLQHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQPLPAITSVLVASASHPLSFI
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
REISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHH
FLAQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNG
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
VGLG
CCCC
>Mature Secondary Structure
MRIDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSREQYRAELT
CEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QEGRVILAEGRRLLQHLANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQI
HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPYYHPQPLPAITSVLVASASHPLSFI
CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
REISLSELQQHVELTIEDSSPNKSYRDEMQFGGDKVFYLSGFIMKKNALLKGLGFGWLPD
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHH
FLAQEELAKGELVEIDFVGGSRFTFIPQLVSTLERPLGRAGQLFTELILEEFAKAEQFNG
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
VGLG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]