| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875838
Identifier: 160875838
GI number: 160875838
Start: 3232423
End: 3233217
Strand: Reverse
Name: 160875838
Synonym: Sbal195_2726
Alternate gene names: NA
Gene position: 3233217-3232423 (Counterclockwise)
Preceding gene: 160875839
Following gene: 160875834
Centisome position: 60.46
GC content: 50.82
Gene sequence:
>795_bases ATGTCTAGACGTTGTCATGAAGTGGATTATGAAATCATCGGCCACAGTATGCAGTTGGTTGAAGTGGAGCTCGATCCTAA CGAAACCGTGGTCGCCGAAGCGGGCGCGATGAACTACCTAGAGCAAGATATTAGCTTTGAGGCCAAAATGGGCGATGGCT CAGAGCCTGAGTCAGGCTTTTTTGGCAAGTTGATGGGCGCAGGTAAGCGGGCGTTGACGGGTGAGAGCATTTTTATGACT CACTTTACCAATCAAGGCAACCAAAAGCGTAAAGTCGCCTTTGCTGCACCTTATCCGGGCACTATCCTTGCGATCGACTT GGCTGAATATGGTGGCGAGCTTATCTGTCAGAAGGACAGTTTTTTAGCGGCGGCCTTAGGTACACGGGTGACGATGAAAT TTAATCGCCGTTTAGGCACGGGCTTTTTCGGTGGCGAAGGGTTTATTCTGCAAAGCCTACAAGGCGATGGCATGACTTTT ATCCATGCGGGCGGCACCTTAGTGAAGAAAGAACTACGAGGCGAAACCTTAAGGGTTGATACAGGTTGTTTGGTTGGATT TACACCTGGGATAGATTACGACATCGAGCGCGCAGGCTCGTTAAAGTCTATGGTATTTGGTGGCGAAGGTTTGTTTTTAG CGACCTTAAAAGGCCATGGCACGGTTTGGCTGCAAAGCTTGCCGTTCTCACGTATGGCGGATCGCATTATCGCCCATGCC CCATCTGCGGGTGGCAGTGATCGCGGTGAAGGTTCAGTGCTTGGTGGTCTTGGCCGCATGCTTGATGGGCGCTAA
Upstream 100 bases:
>100_bases TCTAGATTAACAGTGAAATTGAGCCGCGATAGGTAAAGAGTCGTCCATCGGGGTCAATCTACAGGATAGTAACAAGGAAC TGACAGTTAAGGGGAACAGT
Downstream 100 bases:
>100_bases GCCGTAAGCTCAATCGATTTAAGTCAATCACAGCACCATTTTGCAATCATGCTGTCTCTTCTTAAGGCATGCCAGATAAT CCTCTGGGATGCCTTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSRRCHEVDYEIIGHSMQLVEVELDPNETVVAEAGAMNYLEQDISFEAKMGDGSEPESGFFGKLMGAGKRALTGESIFMT HFTNQGNQKRKVAFAAPYPGTILAIDLAEYGGELICQKDSFLAAALGTRVTMKFNRRLGTGFFGGEGFILQSLQGDGMTF IHAGGTLVKKELRGETLRVDTGCLVGFTPGIDYDIERAGSLKSMVFGGEGLFLATLKGHGTVWLQSLPFSRMADRIIAHA PSAGGSDRGEGSVLGGLGRMLDGR
Sequences:
>Translated_264_residues MSRRCHEVDYEIIGHSMQLVEVELDPNETVVAEAGAMNYLEQDISFEAKMGDGSEPESGFFGKLMGAGKRALTGESIFMT HFTNQGNQKRKVAFAAPYPGTILAIDLAEYGGELICQKDSFLAAALGTRVTMKFNRRLGTGFFGGEGFILQSLQGDGMTF IHAGGTLVKKELRGETLRVDTGCLVGFTPGIDYDIERAGSLKSMVFGGEGLFLATLKGHGTVWLQSLPFSRMADRIIAHA PSAGGSDRGEGSVLGGLGRMLDGR >Mature_263_residues SRRCHEVDYEIIGHSMQLVEVELDPNETVVAEAGAMNYLEQDISFEAKMGDGSEPESGFFGKLMGAGKRALTGESIFMTH FTNQGNQKRKVAFAAPYPGTILAIDLAEYGGELICQKDSFLAAALGTRVTMKFNRRLGTGFFGGEGFILQSLQGDGMTFI HAGGTLVKKELRGETLRVDTGCLVGFTPGIDYDIERAGSLKSMVFGGEGLFLATLKGHGTVWLQSLPFSRMADRIIAHAP SAGGSDRGEGSVLGGLGRMLDGR
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 28285; Mature: 28153
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRCHEVDYEIIGHSMQLVEVELDPNETVVAEAGAMNYLEQDISFEAKMGDGSEPESGF CCCCCHHCCHHHHCCCEEEEEEEECCCCEEEECCCHHHHHHHCCCEEEECCCCCCCCCCC FGKLMGAGKRALTGESIFMTHFTNQGNQKRKVAFAAPYPGTILAIDLAEYGGELICQKDS HHHHHCCCCCEECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEHHCCCEEEEECCC FLAAALGTRVTMKFNRRLGTGFFGGEGFILQSLQGDGMTFIHAGGTLVKKELRGETLRVD EEEEHHCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEHHHHCCCEEEEE TGCLVGFTPGIDYDIERAGSLKSMVFGGEGLFLATLKGHGTVWLQSLPFSRMADRIIAHA CCEEEEECCCCCCCHHCCCCEEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCC PSAGGSDRGEGSVLGGLGRMLDGR CCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SRRCHEVDYEIIGHSMQLVEVELDPNETVVAEAGAMNYLEQDISFEAKMGDGSEPESGF CCCCHHCCHHHHCCCEEEEEEEECCCCEEEECCCHHHHHHHCCCEEEECCCCCCCCCCC FGKLMGAGKRALTGESIFMTHFTNQGNQKRKVAFAAPYPGTILAIDLAEYGGELICQKDS HHHHHCCCCCEECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEHHCCCEEEEECCC FLAAALGTRVTMKFNRRLGTGFFGGEGFILQSLQGDGMTFIHAGGTLVKKELRGETLRVD EEEEHHCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEHHHHCCCEEEEE TGCLVGFTPGIDYDIERAGSLKSMVFGGEGLFLATLKGHGTVWLQSLPFSRMADRIIAHA CCEEEEECCCCCCCHHCCCCEEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCC PSAGGSDRGEGSVLGGLGRMLDGR CCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA