| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875819
Identifier: 160875819
GI number: 160875819
Start: 3215259
End: 3215900
Strand: Direct
Name: 160875819
Synonym: Sbal195_2707
Alternate gene names: NA
Gene position: 3215259-3215900 (Clockwise)
Preceding gene: 160875818
Following gene: 160875822
Centisome position: 60.13
GC content: 47.82
Gene sequence:
>642_bases ATGTCTGCTATCCCGCTTATCGATATTCCCTTCGACCAACGTCATACCTGTTGGTTTTGCGGCGAACCGAGCAATCAACA CTTCGAATATATTGCCCACACACATACGCCACATCCTTCGTTAGCCGTGCCCGCCTGCAACGAATGCTTACGATTAGCCA AACAACATACCCTGAGTTCAATTTGGGATTGTCGTATGGCCGTCAAAGATGCACTGATGCGCATTTATGCAAAACACCTC GCGATTGGGATTAATTGGACCGAAGAAGAACTTGCCGAGTCTGAATTTTCCTGCAAAGTGTTTGAAGGCTTTAAGAAAAG TGCTTGGATGATGTACCAGATTGCCCGCGACCGTATCAATGCACCCGGCTGGCCACTGGTATTAGAAGGCGAAGAAATTG ACGACCAAGGTTATAACGCAGGTTTCGAATTTGATGGCGTGACCTTTAACTCAGTTAATGCTGCAATCCAGTACTACTCG ACGCAATTCACCTTAGATCCTCAGTTTTTTGCCGAACTGGTACGCCTCGTCGGCCGAGCAAGATTCAACTACGCCCTACG ACTCGCCCGCATCCATATTGCCGCCGCCAAAGAAATGAAACGCCAAGTATTACAAGATGTAGAAGCCGAATTCGCCTCGT AA
Upstream 100 bases:
>100_bases TGATCCTATTGTTTTAGCAAAAGATTTGGTTGATGTTGAAGAAGTTTAATCCCTTCAATATGCCATTAATGACATCAAGG ACTGAGGTGCTCATTCCTTG
Downstream 100 bases:
>100_bases TCGAGCGTAAAATAAAAAGGTTATTTGGTAGGATTTGCACAGAAGCGATGGAAAGGTTGCAATTGAATGGCTGATATTAA AAGTCTGATATAAACAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSAIPLIDIPFDQRHTCWFCGEPSNQHFEYIAHTHTPHPSLAVPACNECLRLAKQHTLSSIWDCRMAVKDALMRIYAKHL AIGINWTEEELAESEFSCKVFEGFKKSAWMMYQIARDRINAPGWPLVLEGEEIDDQGYNAGFEFDGVTFNSVNAAIQYYS TQFTLDPQFFAELVRLVGRARFNYALRLARIHIAAAKEMKRQVLQDVEAEFAS
Sequences:
>Translated_213_residues MSAIPLIDIPFDQRHTCWFCGEPSNQHFEYIAHTHTPHPSLAVPACNECLRLAKQHTLSSIWDCRMAVKDALMRIYAKHL AIGINWTEEELAESEFSCKVFEGFKKSAWMMYQIARDRINAPGWPLVLEGEEIDDQGYNAGFEFDGVTFNSVNAAIQYYS TQFTLDPQFFAELVRLVGRARFNYALRLARIHIAAAKEMKRQVLQDVEAEFAS >Mature_212_residues SAIPLIDIPFDQRHTCWFCGEPSNQHFEYIAHTHTPHPSLAVPACNECLRLAKQHTLSSIWDCRMAVKDALMRIYAKHLA IGINWTEEELAESEFSCKVFEGFKKSAWMMYQIARDRINAPGWPLVLEGEEIDDQGYNAGFEFDGVTFNSVNAAIQYYST QFTLDPQFFAELVRLVGRARFNYALRLARIHIAAAKEMKRQVLQDVEAEFAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24412; Mature: 24281
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPLIDIPFDQRHTCWFCGEPSNQHFEYIAHTHTPHPSLAVPACNECLRLAKQHTLSS CCCCCEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH IWDCRMAVKDALMRIYAKHLAIGINWTEEELAESEFSCKVFEGFKKSAWMMYQIARDRIN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC APGWPLVLEGEEIDDQGYNAGFEFDGVTFNSVNAAIQYYSTQFTLDPQFFAELVRLVGRA CCCCCEEEECCCCCCCCCCCCEEECCEEEHHHHHHHHEEEEEEEECHHHHHHHHHHHHHH RFNYALRLARIHIAAAKEMKRQVLQDVEAEFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAIPLIDIPFDQRHTCWFCGEPSNQHFEYIAHTHTPHPSLAVPACNECLRLAKQHTLSS CCCCEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH IWDCRMAVKDALMRIYAKHLAIGINWTEEELAESEFSCKVFEGFKKSAWMMYQIARDRIN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC APGWPLVLEGEEIDDQGYNAGFEFDGVTFNSVNAAIQYYSTQFTLDPQFFAELVRLVGRA CCCCCEEEECCCCCCCCCCCCEEECCEEEHHHHHHHHEEEEEEEECHHHHHHHHHHHHHH RFNYALRLARIHIAAAKEMKRQVLQDVEAEFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA