| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875822
Identifier: 160875822
GI number: 160875822
Start: 3218061
End: 3218612
Strand: Direct
Name: 160875822
Synonym: Sbal195_2710
Alternate gene names: NA
Gene position: 3218061-3218612 (Clockwise)
Preceding gene: 160875819
Following gene: 160875823
Centisome position: 60.18
GC content: 43.12
Gene sequence:
>552_bases ATGAAATTACCTCTTTTTCCACTCCCCATTTGTTTATTGCCCGAAGGTTACACACAACTGCGGGTATTTGAACCTAGATA TAAGCGTTTAGTCGCCGAATCGTTAAAGTCAGGCGAAGGCTTTGGCTTATGTATGCTCGAAGAGGATGGCAAAACCATTC AGCCCATAGGCACCTTAGTGCATATTATTGATTTTGAAACCTTACCCGATGGACTATTAGGGATCAGCATTCAAGGTTCA AAGCGCTTTAAAGTTAATGAAATCAGTGTCGAAGACGATGGCTTGAAGCGCGGCGATGTTAGCTTTATCGACAATTGGCC TGCGACACGTATTGCGACCGATGAGCGTTACTTGAGCCAAATGTTACAAAATATCCTCAAGGAATATCCACAACATCTCA AGCACTATCAAGCGGAACAATTTGAAGACATTGCTTGGGTCTGCCAACGCTGGCTAGAAATATTGCCCGTGCAAGCCTCA GAAAAGTACAACTGCATTAATACCTTAGATCATATTATGACCCGAGACCTATTGCGGGCCGTGATAAAATAA
Upstream 100 bases:
>100_bases CCATCCTCTAAATATGGGTAAACTATTGTTGAATAATTTTACTGATCGAACTGCCACTATGGTACGTAATGATAGGAACA TAAGTTCACCAGAGGCCACG
Downstream 100 bases:
>100_bases TCCTGTGAATGATCCTTTATTTAAGCCACTCCGTATTGATTGACAGTTTGACAGTAAAACTGGGCTCAGAAGTGAAACAA GCCTCTCAATTTTGTCGTTA
Product: peptidase S16 lon domain-containing protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain-Containing Protein; ATP-Dependent Protease La Domain Protein; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKLPLFPLPICLLPEGYTQLRVFEPRYKRLVAESLKSGEGFGLCMLEEDGKTIQPIGTLVHIIDFETLPDGLLGISIQGS KRFKVNEISVEDDGLKRGDVSFIDNWPATRIATDERYLSQMLQNILKEYPQHLKHYQAEQFEDIAWVCQRWLEILPVQAS EKYNCINTLDHIMTRDLLRAVIK
Sequences:
>Translated_183_residues MKLPLFPLPICLLPEGYTQLRVFEPRYKRLVAESLKSGEGFGLCMLEEDGKTIQPIGTLVHIIDFETLPDGLLGISIQGS KRFKVNEISVEDDGLKRGDVSFIDNWPATRIATDERYLSQMLQNILKEYPQHLKHYQAEQFEDIAWVCQRWLEILPVQAS EKYNCINTLDHIMTRDLLRAVIK >Mature_183_residues MKLPLFPLPICLLPEGYTQLRVFEPRYKRLVAESLKSGEGFGLCMLEEDGKTIQPIGTLVHIIDFETLPDGLLGISIQGS KRFKVNEISVEDDGLKRGDVSFIDNWPATRIATDERYLSQMLQNILKEYPQHLKHYQAEQFEDIAWVCQRWLEILPVQAS EKYNCINTLDHIMTRDLLRAVIK
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21119; Mature: 21119
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPLFPLPICLLPEGYTQLRVFEPRYKRLVAESLKSGEGFGLCMLEEDGKTIQPIGTLV CCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHH HIIDFETLPDGLLGISIQGSKRFKVNEISVEDDGLKRGDVSFIDNWPATRIATDERYLSQ HHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEECHHHHHHH MLQNILKEYPQHLKHYQAEQFEDIAWVCQRWLEILPVQASEKYNCINTLDHIMTRDLLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VIK HHC >Mature Secondary Structure MKLPLFPLPICLLPEGYTQLRVFEPRYKRLVAESLKSGEGFGLCMLEEDGKTIQPIGTLV CCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHH HIIDFETLPDGLLGISIQGSKRFKVNEISVEDDGLKRGDVSFIDNWPATRIATDERYLSQ HHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEECHHHHHHH MLQNILKEYPQHLKHYQAEQFEDIAWVCQRWLEILPVQASEKYNCINTLDHIMTRDLLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VIK HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA