| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875807
Identifier: 160875807
GI number: 160875807
Start: 3200494
End: 3201363
Strand: Reverse
Name: 160875807
Synonym: Sbal195_2695
Alternate gene names: NA
Gene position: 3201363-3200494 (Counterclockwise)
Preceding gene: 160875808
Following gene: 160875806
Centisome position: 59.87
GC content: 45.63
Gene sequence:
>870_bases ATGAATGATCAAAAAAATGCGGCGCAGGTAGGGCTGGGCTTACGGCGAGAAATGCTCAGTGAGTTTTGTGTACAGGTGCC TGAAGCTATTAATTTTTTTGAAGTGGCACCAGAAAACTGGATGACCTTAGGCGGTAAGTTTGGCCGTCAATTTCGTGAAC TGACCGAGCAACATACTTTCTACTGCCACGGTTTGAGTTTATCGATTGGTAGCCCTGAACCCTTAGATCTCGCGTTTGTA AAAAACATCAAAACCTTTATGGATTTACATCAAATCCAAGTCTATTCCGAACATTTAAGTTATTGCTCGGGCCAAGGTCA CTTATATGATCTCATGCCTATCCCTTTTACCGACTCAGCGGTAAAGCATGTGGCGGCGCGGGTCAAGCAAGTAGAAGATA TTCTAGAGCGGCCGCTTATTTTAGAAAATGTGTCTTTTTATGCCGCTCCTGGTGCACAAATGAGCGAACTTGAATTCGTT AATGCCGTGCTGCAAGAAGCCGATTGTAAACTGCTACTCGATGTGAACAACATCTATGTGAACTCGATAAATCATCAATA CGATGCCGATACCTTTTTACAGGCCATGCCGACGGAGCGTATCGCTTATCTGCATATCGCTGGGCACTACAAGCAAGCAG AAGATCTACTCATCGACACCCATGGCGCAGCCATTAACGATCCCGTTTGGGCATTGTTGCAACGTTGCTATGCCTTACAT GGGGTAAAGCCGACCTTGCTTGAGCGTGACTTTAATGTGCCGACAACCGCTGAATTGTTGCTCGAGCTAAATCAAATCCA CGCTTATCAAGCGGCAGCGAACAGCTCTCACATTCAAAATAGCGCTCATGTTGTAAAGAGGATCGCCTAA
Upstream 100 bases:
>100_bases TTCCCGCAGTGATGGGGGTTATTGAGTCAAAAGAGGCCAGCCCGCGCTGGTCTCTTTTGTTTTATCCTAAAGCGATGACA GCAAGCGTTCGTGAGGTTCT
Downstream 100 bases:
>100_bases TGGATTTTAAGCAAGTGCAGCAATCCTTTATCGATTATATCCGCGATCCTTCTCGGCCATTGCCCGCGGATACTGATGTC CGGCGCATGCAGGTTTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNDQKNAAQVGLGLRREMLSEFCVQVPEAINFFEVAPENWMTLGGKFGRQFRELTEQHTFYCHGLSLSIGSPEPLDLAFV KNIKTFMDLHQIQVYSEHLSYCSGQGHLYDLMPIPFTDSAVKHVAARVKQVEDILERPLILENVSFYAAPGAQMSELEFV NAVLQEADCKLLLDVNNIYVNSINHQYDADTFLQAMPTERIAYLHIAGHYKQAEDLLIDTHGAAINDPVWALLQRCYALH GVKPTLLERDFNVPTTAELLLELNQIHAYQAAANSSHIQNSAHVVKRIA
Sequences:
>Translated_289_residues MNDQKNAAQVGLGLRREMLSEFCVQVPEAINFFEVAPENWMTLGGKFGRQFRELTEQHTFYCHGLSLSIGSPEPLDLAFV KNIKTFMDLHQIQVYSEHLSYCSGQGHLYDLMPIPFTDSAVKHVAARVKQVEDILERPLILENVSFYAAPGAQMSELEFV NAVLQEADCKLLLDVNNIYVNSINHQYDADTFLQAMPTERIAYLHIAGHYKQAEDLLIDTHGAAINDPVWALLQRCYALH GVKPTLLERDFNVPTTAELLLELNQIHAYQAAANSSHIQNSAHVVKRIA >Mature_289_residues MNDQKNAAQVGLGLRREMLSEFCVQVPEAINFFEVAPENWMTLGGKFGRQFRELTEQHTFYCHGLSLSIGSPEPLDLAFV KNIKTFMDLHQIQVYSEHLSYCSGQGHLYDLMPIPFTDSAVKHVAARVKQVEDILERPLILENVSFYAAPGAQMSELEFV NAVLQEADCKLLLDVNNIYVNSINHQYDADTFLQAMPTERIAYLHIAGHYKQAEDLLIDTHGAAINDPVWALLQRCYALH GVKPTLLERDFNVPTTAELLLELNQIHAYQAAANSSHIQNSAHVVKRIA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 32562; Mature: 32562
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQKNAAQVGLGLRREMLSEFCVQVPEAINFFEVAPENWMTLGGKFGRQFRELTEQHTF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCHHHHHHHHHHHHHCCE YCHGLSLSIGSPEPLDLAFVKNIKTFMDLHQIQVYSEHLSYCSGQGHLYDLMPIPFTDSA EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH VKHVAARVKQVEDILERPLILENVSFYAAPGAQMSELEFVNAVLQEADCKLLLDVNNIYV HHHHHHHHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECEEEE NSINHQYDADTFLQAMPTERIAYLHIAGHYKQAEDLLIDTHGAAINDPVWALLQRCYALH ECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHC GVKPTLLERDFNVPTTAELLLELNQIHAYQAAANSSHIQNSAHVVKRIA CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNDQKNAAQVGLGLRREMLSEFCVQVPEAINFFEVAPENWMTLGGKFGRQFRELTEQHTF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCHHHHHHHHHHHHHCCE YCHGLSLSIGSPEPLDLAFVKNIKTFMDLHQIQVYSEHLSYCSGQGHLYDLMPIPFTDSA EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH VKHVAARVKQVEDILERPLILENVSFYAAPGAQMSELEFVNAVLQEADCKLLLDVNNIYV HHHHHHHHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECEEEE NSINHQYDADTFLQAMPTERIAYLHIAGHYKQAEDLLIDTHGAAINDPVWALLQRCYALH ECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHC GVKPTLLERDFNVPTTAELLLELNQIHAYQAAANSSHIQNSAHVVKRIA CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]