| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875806
Identifier: 160875806
GI number: 160875806
Start: 3199748
End: 3200494
Strand: Reverse
Name: 160875806
Synonym: Sbal195_2694
Alternate gene names: NA
Gene position: 3200494-3199748 (Counterclockwise)
Preceding gene: 160875807
Following gene: 160875805
Centisome position: 59.85
GC content: 46.85
Gene sequence:
>747_bases ATGGATTTTAAGCAAGTGCAGCAATCCTTTATCGATTATATCCGCGATCCTTCTCGGCCATTGCCCGCGGATACTGATGT CCGGCGCATGCAGGTTTACCGCGAGTTATTTTTCAATAATGTGCTGGGATTTGTGTCGAACGGCTTTCCCGTGCTGAAAA GTTTGTACTCTGAAGAAGATTGGTTGGCATTAGTGCAAAGCTTTTTTAGCCAGCACGATTGCCAATCGCCGATTTTTATC GACATCGCGGGCGAGTTTTTAGATTTTTTACAGCAGGAATATCAGCCAACGGCAAATGATCCTGTTTTTATGCTCGAATT AGCGCACTATGAATGGCTAGAATTGGCCGTTGCGGTCACACAGGTGAGTGGGGATGAGTCTCAACTTAGCCCAGCGCAAA TTCCGACGCAGGCGTTATGTTTGTCACAGGCGGCGAGGGTAGCGCAGTATCATTTTGAGGTGCAGCACATTCGTCAGGAT TATCGTCCGCAGCAACAACTCGATACGCCAGTGTTTTTTTGTCTCTATCAAGATGCCGATTGCGAAGTGTGTTTCTTACA GTTAAACCCCTTAAGTGCGCAGGTGCTGGCATTTCTTCAAGCTCAAGGCCAAGCGGGTTTTAAAGAGATAGTTGATTGGT TAACAATCACTTATCCTCAAATGGTGCCAGAAGTTATTGCGCAAGGTTGTAGCCAGTTACTCGAGCAATTAGCGGCCAAA GGGATAGTGCGCGGACGTCAGTCTTAA
Upstream 100 bases:
>100_bases CTGAATTGTTGCTCGAGCTAAATCAAATCCACGCTTATCAAGCGGCAGCGAACAGCTCTCACATTCAAAATAGCGCTCAT GTTGTAAAGAGGATCGCCTA
Downstream 100 bases:
>100_bases GGTTGGGATTATTGCCGAAATAAATGCAATAACCCTACATTTAGAGGGTTTTTATTAATTTGACAAACCGCTACAATGTC GGCCGTTTTGTGATCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MDFKQVQQSFIDYIRDPSRPLPADTDVRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEEDWLALVQSFFSQHDCQSPIFI DIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVTQVSGDESQLSPAQIPTQALCLSQAARVAQYHFEVQHIRQD YRPQQQLDTPVFFCLYQDADCEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMVPEVIAQGCSQLLEQLAAK GIVRGRQS
Sequences:
>Translated_248_residues MDFKQVQQSFIDYIRDPSRPLPADTDVRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEEDWLALVQSFFSQHDCQSPIFI DIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVTQVSGDESQLSPAQIPTQALCLSQAARVAQYHFEVQHIRQD YRPQQQLDTPVFFCLYQDADCEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMVPEVIAQGCSQLLEQLAAK GIVRGRQS >Mature_248_residues MDFKQVQQSFIDYIRDPSRPLPADTDVRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEEDWLALVQSFFSQHDCQSPIFI DIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVTQVSGDESQLSPAQIPTQALCLSQAARVAQYHFEVQHIRQD YRPQQQLDTPVFFCLYQDADCEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMVPEVIAQGCSQLLEQLAAK GIVRGRQS
Specific function: Unknown
COG id: COG3219
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28372; Mature: 28372
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKQVQQSFIDYIRDPSRPLPADTDVRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEED CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH WLALVQSFFSQHDCQSPIFIDIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVT HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH QVSGDESQLSPAQIPTQALCLSQAARVAQYHFEVQHIRQDYRPQQQLDTPVFFCLYQDAD HCCCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCC CEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMVPEVIAQGCSQLLEQLAAK CCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVRGRQS HHHCCCCC >Mature Secondary Structure MDFKQVQQSFIDYIRDPSRPLPADTDVRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEED CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH WLALVQSFFSQHDCQSPIFIDIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVT HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH QVSGDESQLSPAQIPTQALCLSQAARVAQYHFEVQHIRQDYRPQQQLDTPVFFCLYQDAD HCCCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCC CEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMVPEVIAQGCSQLLEQLAAK CCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVRGRQS HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA