| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is bcp [H]
Identifier: 160875781
GI number: 160875781
Start: 3166620
End: 3167087
Strand: Direct
Name: bcp [H]
Synonym: Sbal195_2669
Alternate gene names: 160875781
Gene position: 3166620-3167087 (Clockwise)
Preceding gene: 160875780
Following gene: 160875783
Centisome position: 59.22
GC content: 48.29
Gene sequence:
>468_bases ATGAACACCTTAACGGCTGGGGCAAAAGCGCCTCAATTTACCCTACAAGATCAACATGGCAACTCAGTTTCACTGGCCGA CAGCCTCAAGCAAGGTCCTGTTTTAGTATACTTTTACCCTAAAGCAGCGACGCCGGGTTGCACAGTGCAAGCCTGCGGTC TACGTGACAGCAAAGCCGCGCTCGATAGCCATAACGTGACGGTATTTGGCATTAGCCCAGATCCTGTGGCTAAGCTGGCC AAATTTGCTGAAAAACAAGCGCTCAACTTCACTTTACTGAGCGATGAAGACCACAGTGTCGCCGATGCTTTTGGGGTCTG GGGTGAGAAAAAATTCATGGGTAAAACCTATGATGGCATCCACAGATTAAGCTTCCTTATCAATACCGATGGCACTATTG CCCACGTGTTCGATAAGTTTAAAACCAAAGATCACCATGAAGTCGTACTCGCGCAAATCGCGGGTTAA
Upstream 100 bases:
>100_bases GCTCGAACAGAGTATCTATCAACTCGCCCAAGATATGACCCTAGATTGCACTATTCGTCGTATGGAAGGCACAGCCATTT TAGAGGACAGAGGATAATAG
Downstream 100 bases:
>100_bases TGGCTGATATGACGACTAATAAGACACGTCAAGCTGCTGCTTTAATCGGCAGTAAAATGTAAACGTCGTCAGTTGATGTC GGTAGGCTGAATAAATAATC
Product: thioredoxin-dependent thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNTLTAGAKAPQFTLQDQHGNSVSLADSLKQGPVLVYFYPKAATPGCTVQACGLRDSKAALDSHNVTVFGISPDPVAKLA KFAEKQALNFTLLSDEDHSVADAFGVWGEKKFMGKTYDGIHRLSFLINTDGTIAHVFDKFKTKDHHEVVLAQIAG
Sequences:
>Translated_155_residues MNTLTAGAKAPQFTLQDQHGNSVSLADSLKQGPVLVYFYPKAATPGCTVQACGLRDSKAALDSHNVTVFGISPDPVAKLA KFAEKQALNFTLLSDEDHSVADAFGVWGEKKFMGKTYDGIHRLSFLINTDGTIAHVFDKFKTKDHHEVVLAQIAG >Mature_155_residues MNTLTAGAKAPQFTLQDQHGNSVSLADSLKQGPVLVYFYPKAATPGCTVQACGLRDSKAALDSHNVTVFGISPDPVAKLA KFAEKQALNFTLLSDEDHSVADAFGVWGEKKFMGKTYDGIHRLSFLINTDGTIAHVFDKFKTKDHHEVVLAQIAG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=66.6666666666667, Blast_Score=203, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6322180, Length=112, Percent_Identity=40.1785714285714, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16720; Mature: 16720
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLTAGAKAPQFTLQDQHGNSVSLADSLKQGPVLVYFYPKAATPGCTVQACGLRDSKAA CCCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHH LDSHNVTVFGISPDPVAKLAKFAEKQALNFTLLSDEDHSVADAFGVWGEKKFMGKTYDGI HCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCHHCCCCHHHH HRLSFLINTDGTIAHVFDKFKTKDHHEVVLAQIAG EEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure MNTLTAGAKAPQFTLQDQHGNSVSLADSLKQGPVLVYFYPKAATPGCTVQACGLRDSKAA CCCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHH LDSHNVTVFGISPDPVAKLAKFAEKQALNFTLLSDEDHSVADAFGVWGEKKFMGKTYDGI HCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCHHCCCCHHHH HRLSFLINTDGTIAHVFDKFKTKDHHEVVLAQIAG EEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]