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The map label for this gene is sucC [H]

Identifier: 160875738

GI number: 160875738

Start: 3109837

End: 3111003

Strand: Reverse

Name: sucC [H]

Synonym: Sbal195_2626

Alternate gene names: 160875738

Gene position: 3111003-3109837 (Counterclockwise)

Preceding gene: 160875739

Following gene: 160875737

Centisome position: 58.18

GC content: 46.7

Gene sequence:

>1167_bases
ATGAATTTGCATGAGTATCAGGCAAAATCCTTATTTGCCGAATATGGTTTACCAGTGTCAGAAGGTTTTGCATGTGATAC
AGCCCAAGAAGCTGTAGAAGCTGCAGGCCATATTGGCGGAAATTTATGGGTTGTTAAGTGTCAAGTACACGCTGGCGGCC
GCGGTAAAGCGGGTGGCGTTAAAGTCACTGGCGATAAAGAAGAAATCAGAGCCTTTGCCGAACACTGGTTAGGCAAAAAT
CTGGTGACTTATCAAACTGATGAGAAAGGTCAGCCAGTAGCTAAAATTTTAGTAGAAAGCTGCACCGACATCGCTAACGA
ACTGTACCTAGGTGCCGTTGTTGACCGCGCGACTCGTCGCGTTGTGTTCATGGCGTCGACTGAAGGTGGTGTTGAAATTG
AGAAAGTGGCAGAAGAAACGCCAGAACTCATCCACACTGCAATCATCGATCCTTTGACTGGTCCACAAGGTTATCAAGCA
CGTGATCTTGGCTTCAAGTTAGGTTTAAACCCAACTCAAATGAAGCAGTTCACTAAGATTTTCATGGGTCTGGCGACTAT
GTTCGTTGATCATGATTTCGCATTGCTTGAAATCAACCCGCTGGTTATTACCACTGAAGGCAACCTACACTGCCTAGACG
GTAAAATCGGTATCGACGGTAACGCACTTTATCGTCAACCAAAAATCAAAGGCATGCACGATCCATCACAGGATGATGCC
CGCGAAGCTCACGCTGCTAAGTTCGAACTGAACTATGTAGCATTAGACGGTAACGTTGGCTGTATGGTCAACGGTGCAGG
TCTGGCTATGGGTACTATGGATATCGTTAACTTGCACGGTGGCAAGCCAGCGAACTTCCTAGACGTAGGCGGCGGCGCGA
CTAAAGAACGTGTAGCAGAAGCATTCAAAATCATTCTGTCTGACAGCAATGTGAAAGCGGTTCTGGTTAACATTTTCGGC
GGTATCGTACGTTGTGACATGATCGCAGAAGGTATTATCGGCGCGGTTAAAGAAGTGGGCGTTAAAGTACCAGTTGTGGT
TCGTTTAGAAGGTACTAACGCTGAACTTGGCCGTGAAGTATTAGCTAAATCAGGTCTTGATATCATTGCAGCTACCAGTC
TGACTGACGCGGCTGAGCAAGTTGTTAAAGCTGCGGAGGGCAAATAA

Upstream 100 bases:

>100_bases
CTCGATAAGAGTTTGCGCTTAAAGAAATAGCCAGACATACCCTCGTGACTGGCCCAAACGGGCCAGTTGGATTTGATTAG
AAGTATACGGATAGATCATC

Downstream 100 bases:

>100_bases
TGTCTGTCTTAATCAATAAAGATACCAAGGTAATTTGCCAAGGTTTCACTGGCGGTCAAGGTACATTCCACTCACAACAA
GCTATCGATTACGGTACGCA

Product: succinyl-CoA synthetase subunit beta

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKAGGVKVTGDKEEIRAFAEHWLGKN
LVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQA
RDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIKGMHDPSQDDA
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFG
GIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEGK

Sequences:

>Translated_388_residues
MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKAGGVKVTGDKEEIRAFAEHWLGKN
LVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQA
RDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIKGMHDPSQDDA
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFG
GIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEGK
>Mature_388_residues
MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKAGGVKVTGDKEEIRAFAEHWLGKN
LVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQA
RDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIKGMHDPSQDDA
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFG
GIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEGK

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI11321583, Length=393, Percent_Identity=45.8015267175573, Blast_Score=339, Evalue=2e-93,
Organism=Homo sapiens, GI157779135, Length=387, Percent_Identity=44.702842377261, Blast_Score=316, Evalue=2e-86,
Organism=Homo sapiens, GI294862256, Length=366, Percent_Identity=45.0819672131148, Blast_Score=300, Evalue=1e-81,
Organism=Escherichia coli, GI1786948, Length=388, Percent_Identity=76.5463917525773, Blast_Score=585, Evalue=1e-168,
Organism=Caenorhabditis elegans, GI17567829, Length=389, Percent_Identity=43.7017994858612, Blast_Score=310, Evalue=7e-85,
Organism=Caenorhabditis elegans, GI17539378, Length=400, Percent_Identity=41.75, Blast_Score=304, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6321683, Length=393, Percent_Identity=42.4936386768448, Blast_Score=323, Evalue=3e-89,
Organism=Drosophila melanogaster, GI21356231, Length=396, Percent_Identity=43.1818181818182, Blast_Score=300, Evalue=8e-82,
Organism=Drosophila melanogaster, GI161078106, Length=393, Percent_Identity=42.7480916030534, Blast_Score=296, Evalue=2e-80,
Organism=Drosophila melanogaster, GI24645208, Length=393, Percent_Identity=42.7480916030534, Blast_Score=296, Evalue=2e-80,
Organism=Drosophila melanogaster, GI281361397, Length=394, Percent_Identity=42.8934010152284, Blast_Score=293, Evalue=1e-79,
Organism=Drosophila melanogaster, GI281361395, Length=394, Percent_Identity=42.8934010152284, Blast_Score=293, Evalue=1e-79,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR017866
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 41267; Mature: 41267

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50975 ATP_GRASP ; PS01217 SUCCINYL_COA_LIG_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKAGGV
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCE
KVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRR
EEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKI
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH
FMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIKGMHDPSQDDA
HHHHHHHHHCCCEEEEEEEEEEEEECCCEEEECCEECCCCCCEEECCCCCCCCCCCCHHH
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE
HHHHHEEEEEEEEEECCCCEEEEECCCEEECCEEEEEECCCCCCCEEECCCCCCHHHHHH
AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREV
HHHHEECCCCCCEEHEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LAKSGLDIIAATSLTDAAEQVVKAAEGK
HHHCCCCEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKAGGV
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCE
KVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRR
EEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKI
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH
FMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIKGMHDPSQDDA
HHHHHHHHHCCCEEEEEEEEEEEEECCCEEEECCEECCCCCCEEECCCCCCCCCCCCHHH
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE
HHHHHEEEEEEEEEECCCCEEEEECCCEEECCEEEEEECCCCCCCEEECCCCCCHHHHHH
AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREV
HHHHEECCCCCCEEHEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LAKSGLDIIAATSLTDAAEQVVKAAEGK
HHHCCCCEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA