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The map label for this gene is clpS

Identifier: 160875698

GI number: 160875698

Start: 3060252

End: 3060560

Strand: Reverse

Name: clpS

Synonym: Sbal195_2586

Alternate gene names: 160875698

Gene position: 3060560-3060252 (Counterclockwise)

Preceding gene: 160875700

Following gene: 160875697

Centisome position: 57.24

GC content: 40.13

Gene sequence:

>309_bases
ATGGCAAAGATAGGAAATATTGAACACGTTGAAGAACGTGTCGAATCAGAGTTAATGCCGCCTTCGATGTATAAGGTGGT
ACTCAATAATGATGATTACACCCCAATGGATTTTGTGATTGAAGTTTTGCAGGTTTTCTTTCGCAAGAACGAGCAGGAAG
CGACCGATATCATGTTGACGATCCATCACCAAGGAAAAGGTATTTGCGGTATTTTCCCGTTTGGGATTGCAGAAACCAAG
GTGATACAAGTAAATCAATTTGCAAGACAAAACCAACATCCGTTACTGTGTTCGTTAGAGAAAGCATAA

Upstream 100 bases:

>100_bases
GTAAAAGCGGAAGTCAAGCTAAAATTAACAAAGGGGTAACAACTGATTAATTTGAACGGATCAATTGGAAGAGGCCAACA
CGAGAGGCTAGTATTAAAAA

Downstream 100 bases:

>100_bases
AACCGCTTTACTCTGTAGTCTGTTGTTAATTTTGGGGGTGCTTATGCTGAACAAAGACCTGGAAGTCACCTTAAATCTGG
CGTTTCAGCAAGCCAGAGAC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLTIHHQGKGICGIFPFGIAETK
VIQVNQFARQNQHPLLCSLEKA

Sequences:

>Translated_102_residues
MAKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLTIHHQGKGICGIFPFGIAETK
VIQVNQFARQNQHPLLCSLEKA
>Mature_101_residues
AKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLTIHHQGKGICGIFPFGIAETKV
IQVNQFARQNQHPLLCSLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=92, Percent_Identity=63.0434782608696, Blast_Score=132, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_SHEB2 (B8E950)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357806.1
- ProteinModelPortal:   B8E950
- SMR:   B8E950
- GeneID:   7086552
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1878
- HOGENOM:   HBG644923
- OMA:   VFPFGIA
- ProtClustDB:   CLSK906806
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11704; Mature: 11573

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLT
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEKA
EECCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
AKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLT
CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEKA
EECCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA