| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yceG [C]
Identifier: 160875685
GI number: 160875685
Start: 3046869
End: 3047906
Strand: Reverse
Name: yceG [C]
Synonym: Sbal195_2573
Alternate gene names: 160875685
Gene position: 3047906-3046869 (Counterclockwise)
Preceding gene: 160875686
Following gene: 160875684
Centisome position: 57.0
GC content: 47.98
Gene sequence:
>1038_bases ATGAAAAAACTCATTCTTATCGCCAGTTCAACCCTGTTGACCTTGCTGACATTAGTCTGTTTTGGCGCCTTTTGGGGCTA TCAAACTGTCATCGAATACAGTCAAACGCCGCTGAGTCTCAGCGAGCCTAAAGAGCTGACCGTTGAACGCGGTACCAGCG TGAACCAGCTTGCGCAGCAACTTGCCGACGATGGTGTGATTCAAGACACGTGGAAACTCAAGTGGCTACTTAAGTTCCGC CCTGAGCTTGCTAAGATCCGCTCGGGTCTTTACGAAATCTCACCTTCACAAACCATTACCGATTTGCTGAATGATTTGAT TGCCGGAAAAGTGAAAACCTTCAGTTTGACCTTAGTTGAAGGTAAAACCATCGTTGAATGGGAACAACAACTTGCCAGCG CGCCGCATTTACAGATGTCACCAGAAGTGTTTGCCGCGGTCTTGATGGCGCAGGGCGATGATTCAGGTTTGCCAGAGGGT AAATTCTTCCCCGACACCTATCATTATACTGCTGAGGCGGATGTTAAAGTCCTGCTGACTCAAAGCTATAAGATGATGGA GCAAGAGCTTGCCAAAGCGTGGGCAGAACGGGCGCCGAATTTGCCGTTAAAATCCCCCTATGAAATGCTGATCTTGGCAT CGATAGTCGAGAAGGAAACCGGCCAAGCCCATGAGCGCGACCAAATTGCCGGAGTATTCGTTAATCGTCTTAATCAAGGC ATGCGTCTGCAAACCGACCCGACGGTTATTTATGGCATGGGCGAACGCTATAAGGGCAATATCACCCGTAAAGATTTAGT CGAAGAGACACCTTTTAACACTTACCGTATTTTTGGATTACCGCCAACGCCGATTGCAGCACCGAGTAAAGCCTCACTGA TGGCAGTGTCTAAACCCGCTAGTGTGAGTTATCTCTATTTCGTGTCACGCAACGATGGTACCCATGTGTTTTCAAGCACA CTTGAAGCACACAACCAAGCTGTAGATGTGTATCAGCGTAAGAAAAAACCGGCGACGCCAGAAAAATCACCAAAGTAA
Upstream 100 bases:
>100_bases ACAGCGTTTTAGGAATTGTGGATGTGCTGGCGATTGATTCGCTCATGTTCAGCCGTGCTCCGATTACCGCGCAACTTAGA CAGACACTTTCACTCACCCT
Downstream 100 bases:
>100_bases AAATGCAGAGAAAGAAAATCCAATGTCAGTTTTTGCAAAATTTATCGTTATTGAAGGTTTAGAAGGCGCGGGTAAGTCGA GTGCGATTAACCTTATTCGC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKKLILIASSTLLTLLTLVCFGAFWGYQTVIEYSQTPLSLSEPKELTVERGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRSGLYEISPSQTITDLLNDLIAGKVKTFSLTLVEGKTIVEWEQQLASAPHLQMSPEVFAAVLMAQGDDSGLPEG KFFPDTYHYTAEADVKVLLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHERDQIAGVFVNRLNQG MRLQTDPTVIYGMGERYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSST LEAHNQAVDVYQRKKKPATPEKSPK
Sequences:
>Translated_345_residues MKKLILIASSTLLTLLTLVCFGAFWGYQTVIEYSQTPLSLSEPKELTVERGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRSGLYEISPSQTITDLLNDLIAGKVKTFSLTLVEGKTIVEWEQQLASAPHLQMSPEVFAAVLMAQGDDSGLPEG KFFPDTYHYTAEADVKVLLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHERDQIAGVFVNRLNQG MRLQTDPTVIYGMGERYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSST LEAHNQAVDVYQRKKKPATPEKSPK >Mature_345_residues MKKLILIASSTLLTLLTLVCFGAFWGYQTVIEYSQTPLSLSEPKELTVERGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRSGLYEISPSQTITDLLNDLIAGKVKTFSLTLVEGKTIVEWEQQLASAPHLQMSPEVFAAVLMAQGDDSGLPEG KFFPDTYHYTAEADVKVLLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHERDQIAGVFVNRLNQG MRLQTDPTVIYGMGERYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSST LEAHNQAVDVYQRKKKPATPEKSPK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=309, Percent_Identity=41.4239482200647, Blast_Score=239, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38536; Mature: 38536
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLILIASSTLLTLLTLVCFGAFWGYQTVIEYSQTPLSLSEPKELTVERGTSVNQLAQQ CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHH LADDGVIQDTWKLKWLLKFRPELAKIRSGLYEISPSQTITDLLNDLIAGKVKTFSLTLVE HHCCCCCCCHHHHHHHHHHCHHHHHHHCCCEECCCCHHHHHHHHHHHHCCEEEEEEEEEC GKTIVEWEQQLASAPHLQMSPEVFAAVLMAQGDDSGLPEGKFFPDTYHYTAEADVKVLLT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEH QSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHERDQIAGVFVNRLNQG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC MRLQTDPTVIYGMGERYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPA CEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCC SVSYLYFVSRNDGTHVFSSTLEAHNQAVDVYQRKKKPATPEKSPK CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKLILIASSTLLTLLTLVCFGAFWGYQTVIEYSQTPLSLSEPKELTVERGTSVNQLAQQ CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHH LADDGVIQDTWKLKWLLKFRPELAKIRSGLYEISPSQTITDLLNDLIAGKVKTFSLTLVE HHCCCCCCCHHHHHHHHHHCHHHHHHHCCCEECCCCHHHHHHHHHHHHCCEEEEEEEEEC GKTIVEWEQQLASAPHLQMSPEVFAAVLMAQGDDSGLPEGKFFPDTYHYTAEADVKVLLT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEH QSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHERDQIAGVFVNRLNQG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC MRLQTDPTVIYGMGERYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPA CEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCC SVSYLYFVSRNDGTHVFSSTLEAHNQAVDVYQRKKKPATPEKSPK CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]