| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pabC [H]
Identifier: 160875686
GI number: 160875686
Start: 3047903
End: 3048712
Strand: Reverse
Name: pabC [H]
Synonym: Sbal195_2574
Alternate gene names: 160875686
Gene position: 3048712-3047903 (Counterclockwise)
Preceding gene: 160875687
Following gene: 160875685
Centisome position: 57.01
GC content: 48.27
Gene sequence:
>810_bases GTGTTTTGGGTGAATGGCGCATCGCTGGCGAGTGTCGACCCTTCCGATCGAGGGCTTGCCTACGGTGATGGCTTGTTTGC GACTATGCGGACAGGCGCTGAGGGGATTTTGTTTTTCGACGCCCATCAAGCTCGTTTAACCGCAGGCGCCGCAAGGCTTG GGTTTCAATGGCAAATGAGTGAAGCACTGCAACAGCAGCTTCATGCCTTAGCCATTGAATATCCACATCATTGCATTAAG TTAATCGTTTCCCGTGGTGTTGGTGGCCGTGGTTACACACCACCAGAAACGGTTAATCCTACCGAAATCGTCTCTGTTCA TGCTATTCCAAGCCATTATGCAAAGTGGCAGCAAGCGGGCATTTGCCTTAAAACCTCGTCGATACGATTGGGTTTGCAGC CCTTGTTGGCTGGGATGAAGCATTTAAATCGACTCGAACAAGTCTTGATAAAATCCCACCCTTTACCTCAGGGGTTTGAT GACTGGTTAGTTAACGATATCGAAGACAATGTGATTGAATCTTCGATGGCCAATGTGTTTTTTATCAAAGGCAATCGCGT TATAACACCTTCATTAGCCCAGTGCGGCGTGGCGGGTGTGATGCGCGAACAGGTTATGATAGCCTTGCTTGAACAGAACA TGAATATCGAATGTTTGCCCGTTGGCGCCGAGCGTTTAATTGAATTTGACTCAGCGTTTATCACTAACAGCGTTTTAGGA ATTGTGGATGTGCTGGCGATTGATTCGCTCATGTTCAGCCGTGCTCCGATTACCGCGCAACTTAGACAGACACTTTCACT CACCCTATGA
Upstream 100 bases:
>100_bases TCAATCATGCGGTTGCACGTCCTTATAACACCCGTAAAAGTGCCAAGTATAAAGATCAGCAAGAAGCGGTCGCCAGCCGT ATCAGTCAGGACTAACACAA
Downstream 100 bases:
>100_bases AAAAACTCATTCTTATCGCCAGTTCAACCCTGTTGACCTTGCTGACATTAGTCTGTTTTGGCGCCTTTTGGGGCTATCAA ACTGTCATCGAATACAGTCA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: 4-amino-4-deoxychorismate lyase; ADC lyase; ADCL [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MFWVNGASLASVDPSDRGLAYGDGLFATMRTGAEGILFFDAHQARLTAGAARLGFQWQMSEALQQQLHALAIEYPHHCIK LIVSRGVGGRGYTPPETVNPTEIVSVHAIPSHYAKWQQAGICLKTSSIRLGLQPLLAGMKHLNRLEQVLIKSHPLPQGFD DWLVNDIEDNVIESSMANVFFIKGNRVITPSLAQCGVAGVMREQVMIALLEQNMNIECLPVGAERLIEFDSAFITNSVLG IVDVLAIDSLMFSRAPITAQLRQTLSLTL
Sequences:
>Translated_269_residues MFWVNGASLASVDPSDRGLAYGDGLFATMRTGAEGILFFDAHQARLTAGAARLGFQWQMSEALQQQLHALAIEYPHHCIK LIVSRGVGGRGYTPPETVNPTEIVSVHAIPSHYAKWQQAGICLKTSSIRLGLQPLLAGMKHLNRLEQVLIKSHPLPQGFD DWLVNDIEDNVIESSMANVFFIKGNRVITPSLAQCGVAGVMREQVMIALLEQNMNIECLPVGAERLIEFDSAFITNSVLG IVDVLAIDSLMFSRAPITAQLRQTLSLTL >Mature_269_residues MFWVNGASLASVDPSDRGLAYGDGLFATMRTGAEGILFFDAHQARLTAGAARLGFQWQMSEALQQQLHALAIEYPHHCIK LIVSRGVGGRGYTPPETVNPTEIVSVHAIPSHYAKWQQAGICLKTSSIRLGLQPLLAGMKHLNRLEQVLIKSHPLPQGFD DWLVNDIEDNVIESSMANVFFIKGNRVITPSLAQCGVAGVMREQVMIALLEQNMNIECLPVGAERLIEFDSAFITNSVLG IVDVLAIDSLMFSRAPITAQLRQTLSLTL
Specific function: Converts 4-amino-4-deoxychorismate into 4-aminobenzoate (PABA) and pyruvate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787338, Length=261, Percent_Identity=38.3141762452107, Blast_Score=171, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017824 - InterPro: IPR001544 - InterPro: IPR018300 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =4.1.3.38 [H]
Molecular weight: Translated: 29420; Mature: 29420
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWVNGASLASVDPSDRGLAYGDGLFATMRTGAEGILFFDAHQARLTAGAARLGFQWQMS CEEECCCCEECCCCCCCCEEECCCHHEEHHCCCCEEEEEECCHHHHHHHHHHHCCCHHHH EALQQQLHALAIEYPHHCIKLIVSRGVGGRGYTPPETVNPTEIVSVHAIPSHYAKWQQAG HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHHCC ICLKTSSIRLGLQPLLAGMKHLNRLEQVLIKSHPLPQGFDDWLVNDIEDNVIESSMANVF EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEE FIKGNRVITPSLAQCGVAGVMREQVMIALLEQNMNIECLPVGAERLIEFDSAFITNSVLG EEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH IVDVLAIDSLMFSRAPITAQLRQTLSLTL HHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MFWVNGASLASVDPSDRGLAYGDGLFATMRTGAEGILFFDAHQARLTAGAARLGFQWQMS CEEECCCCEECCCCCCCCEEECCCHHEEHHCCCCEEEEEECCHHHHHHHHHHHCCCHHHH EALQQQLHALAIEYPHHCIKLIVSRGVGGRGYTPPETVNPTEIVSVHAIPSHYAKWQQAG HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHHCC ICLKTSSIRLGLQPLLAGMKHLNRLEQVLIKSHPLPQGFDDWLVNDIEDNVIESSMANVF EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEE FIKGNRVITPSLAQCGVAGVMREQVMIALLEQNMNIECLPVGAERLIEFDSAFITNSVLG EEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH IVDVLAIDSLMFSRAPITAQLRQTLSLTL HHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644759; 8905232; 9278503; 2071583; 2251281; 10876155 [H]